| Assessment of ethanol tolerance of Kluyveromyces marxianus CCT 7735 selected by adaptive laboratory evolution FA da Silveira, DL de Oliveira Soares, KW Bang, TR Balbino, ... Applied microbiology and biotechnology 104, 7483-7494, 2020 | 26 | 2020 |
| Protein abundance prediction through machine learning methods M Ferreira, R Ventorim, E Almeida, S Silveira, W Silveira Journal of molecular biology 433 (22), 167267, 2021 | 17 | 2021 |
| Ethanol stress responses in Kluyveromyces marxianus: current knowledge and perspectives MA de Moura Ferreira, FA da Silveira, WB da Silveira Applied Microbiology and Biotechnology 106 (4), 1341-1353, 2022 | 11 | 2022 |
| Papiliotrema laurentii: general features and biotechnological applications ELM de Almeida, RZ Ventorim, MA de Moura Ferreira, WB da Silveira Applied Microbiology and Biotechnology 106 (21), 6963-6976, 2022 | 10 | 2022 |
| Insights into oleaginous phenotype of the yeast Papiliotrema laurentii NM Vieira, RZ Ventorim, MA de Moura Ferreira, GB de Souza, ... Fungal Genetics and Biology 144, 103456, 2020 | 9 | 2020 |
| Genome-scale metabolic model of oleaginous yeast Papiliotrema laurentii RZ Ventorim, MA de Moura Ferreira, ELM de Almeida, EJ Kerkhoven, ... Biochemical Engineering Journal 180, 108353, 2022 | 8 | 2022 |
| New Papiliotrema laurentii UFV-1 strains with improved acetic acid tolerance selected by adaptive laboratory evolution ELM Almeida, RZ Ventorim, MAM Ferreira, MD Costa, HC Mantovani, ... Fungal Genetics and Biology 164, 103765, 2023 | 5 | 2023 |
| Protein constraints in genome‐scale metabolic models: Data integration, parameter estimation, and prediction of metabolic phenotypes MAM Ferreira, WB Silveira, Z Nikoloski Biotechnology and Bioengineering, 2024 | 4 | 2024 |
| PARROT: Prediction of enzyme abundances using protein-constrained metabolic models MAM Ferreira, WB Silveira, Z Nikoloski PLoS Computational Biology 19 (10), e1011549, 2023 | 2 | 2023 |
| Accurate prediction of in vivo protein abundances by coupling constraint-based modelling and machine learning MA de Moura Ferreira, P Wendering, M Arend, WB da Silveira, Z Nikoloski Metabolic Engineering 80, 184-192, 2023 | 1 | 2023 |
| Machine learning prediction of protein abundance by codon usage metrics MAM Ferreira Universidade Federal de Viçosa, 2020 | 1 | 2020 |
| Genomics and Phylogeny of Rhodotorula glutinis and Rhodotorula kratochvilovae Isolated from the Northern Peruvian Andes VJV Villalobos, AMA Hidalgo-Arteaga, RB Sosa-Becerra, ... HAYATI Journal of Biosciences 31 (4), 793-802, 2024 | | 2024 |
| lista-GEM: the genome-scale metabolic reconstruction of Lipomyces starkeyi E Almeida, M Ferreira, W Silveira bioRxiv, 2023.09. 25.559328, 2023 | | 2023 |
