GuideScan software for improved single and paired CRISPR guide RNA design AR Perez, Y Pritykin, JA Vidigal, S Chhangawala, L Zamparo, CS Leslie, ... Nature biotechnology 35 (4), 347-349, 2017 | 233 | 2017 |
An integrated model for detecting significant chromatin interactions from high-resolution Hi-C data M Carty, L Zamparo, M Sahin, A González, R Pelossof, O Elemento, ... Nature communications 8 (1), 15454, 2017 | 77 | 2017 |
Beyond trivial counterfactual explanations with diverse valuable explanations P Rodriguez, M Caccia, A Lacoste, L Zamparo, I Laradji, L Charlin, ... Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2021 | 51 | 2021 |
Sequential CRISPR gene editing in human iPSCs charts the clonal evolution of myeloid leukemia and identifies early disease targets T Wang, AR Pine, AG Kotini, H Yuan, L Zamparo, DT Starczynowski, ... Cell Stem Cell 28 (6), 1074-1089. e7, 2021 | 45 | 2021 |
BindSpace decodes transcription factor binding signals by large-scale sequence embedding H Yuan, M Kshirsagar, L Zamparo, Y Lu, CS Leslie Nature methods 16 (9), 858-861, 2019 | 40 | 2019 |
Exploring quantitative yeast phenomics with single-cell analysis of DNA damage foci EB Styles, KJ Founk, LA Zamparo, TL Sing, D Altintas, C Ribeyre, ... Cell systems 3 (3), 264-277. e10, 2016 | 31 | 2016 |
Deep autoencoders for dimensionality reduction of high-content screening data L Zamparo, Z Zhang arXiv preprint arXiv:1501.01348, 2015 | 23 | 2015 |
PhenoM: a database of morphological phenotypes caused by mutation of essential genes in Saccharomyces cerevisiae K Jin, J Li, FS Vizeacoumar, Z Li, R Min, L Zamparo, FJ Vizeacoumar, ... Nucleic acids research 40 (D1), D687-D694, 2012 | 19 | 2012 |
Memview: a pedagogically-motivated visual debugger P Gries, V Mnih, J Taylor, G Wilson, L Zamparo Proceedings Frontiers in Education 35th Annual Conference, S1J-11, 2005 | 16 | 2005 |
Statistical lower bounds on protein copy number from fluorescence expression images L Zamparo, TJ Perkins Bioinformatics 25 (20), 2670-2676, 2009 | 13 | 2009 |
Method and system for meaningful counterfactual explanations PR LOPEZ, M Caccia, L Zamparo, I Laradji, A Lacoste, DV BERMUDEZ US Patent 11,961,287, 2024 | 8 | 2024 |
Exploring quantitative yeast phenomics with single-cell analysis of DNA damage foci. Cell Syst. 3: 264–277. e10 EB Styles, KJ Founk, LA Zamparo, TL Sing, D Altintas, C Ribeyre, ... | 5 | 2016 |
Globin vector regulatory elements are active in early hematopoietic progenitor cells A Cabriolu, A Odak, L Zamparo, H Yuan, CS Leslie, M Sadelain Molecular Therapy 30 (6), 2199-2209, 2022 | 3 | 2022 |
Sequential CRISPR gene editing in human iPSCs charts the clonal evolution of leukemia T Wang, AR Pine, J Wesely, H Yuan, L Zamparo, AG Kotini, C Leslie, ... bioRxiv, 2020.04. 21.051961, 2020 | 1 | 2020 |
BindSpace: decoding transcription factor binding signals by large-scale joint embedding H Yuan, M Kshirsagar, L Zamparo, Y Lu, CS Leslie bioRxiv, 359539, 2018 | | 2018 |
A Phenomic assessment of sub-cellular morphology in S. cerevisiae using synthetic genetic array and high-content screening E Styles, L Zamparo, A Verster, K Founk, K Kraus, D Altintas, D Novarina, ... YEAST 32 (suppl. 1), S59-S59, 2015 | | 2015 |
Analyzing phenotypes in high-content screening with machine learning L Zamparo University of Toronto (Canada), 2015 | | 2015 |
Two methods to estimate protein copy number from drosophila embryo image data L Zamparo Concordia University, 2009 | | 2009 |
Quantitative Yeast Phenomics: Systematic Single Cell Analysis of DNA Damage Foci EB Styles, KJ Founk, LA Zamparo, TL Sing, D Altintas, C Ribeyre, ... | | |
Supplementary Material Beyond Trivial Counterfactual Explanations with Diverse Valuable Explanations P Rodrıguez, M Caccia, A Lacoste, L Zamparo, I Laradji, L Charlin, ... | | |