Javier Ramiro-Garcia
Javier Ramiro-Garcia
Spanish National Research Council, Instituto de la Grasa
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Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential
L Wampach, A Heintz-Buschart, JV Fritz, J Ramiro-Garcia, J Habier, ...
Nature communications 9 (1), 5091, 2018
NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes
J Ramiro-Garcia, GDA Hermes, C Giatsis, D Sipkema, EG Zoetendal, ...
F1000Research 5, 2016
A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets
MM Leimena, J Ramiro-Garcia, M Davids, B van den Bogert, H Smidt, ...
BMC genomics 14, 1-14, 2013
To pool or not to pool? Impact of the use of individual and pooled fecal samples for in vitro fermentation studies
M Aguirre, J Ramiro-Garcia, ME Koenen, K Venema
Journal of microbiological methods 107, 1-7, 2014
Probiotic legacy effects on gut microbial assembly in tilapia larvae
C Giatsis, D Sipkema, J Ramiro-Garcia, GM Bacanu, J Abernathy, ...
Scientific reports 6 (1), 33965, 2016
Integrated in vitro and in silico modeling delineates the molecular effects of a synbiotic regimen on colorectal-cancer-derived cells
K Greenhalgh, J Ramiro-Garcia, A Heinken, P Ullmann, T Bintener, ...
Cell reports 27 (5), 1621-1632. e9, 2019
Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions
D Versluis, MM D’Andrea, J Ramiro Garcia, MM Leimena, F Hugenholtz, ...
Scientific reports 5 (1), 11981, 2015
Geochemical and microbial community determinants of reductive dechlorination at a site biostimulated with glycerol
S Atashgahi, Y Lu, Y Zheng, E Saccenti, M Suarez‐Diez, J Ramiro‐Garcia, ...
Environmental microbiology 19 (3), 968-981, 2017
A novel biomarker panel for irritable bowel syndrome and the application in the general population
Z Mujagic, EF Tigchelaar, A Zhernakova, T Ludwig, J Ramiro-Garcia, ...
Scientific reports 6 (1), 26420, 2016
Effect of nickel and cobalt on methanogenic enrichment cultures and role of biogenic sulfide in metal toxicity attenuation
LM Paulo, J Ramiro-Garcia, S van Mourik, AJM Stams, DZ Sousa
Frontiers in microbiology 8, 264275, 2017
Changes in rumen microbiota composition and in situ degradation kinetics during the dry period and early lactation as affected by rate of increase of concentrate allowance
K Dieho, B Van den Bogert, G Henderson, A Bannink, J Ramiro-Garcia, ...
Journal of Dairy Science 100 (4), 2695-2710, 2017
Growth and activity of ANME clades with different sulfate and sulfide concentrations in the presence of methane
PH Timmers, HCA Widjaja-Greefkes, J Ramiro-Garcia, CM Plugge, ...
Frontiers in microbiology 6, 157118, 2015
Dietary protein sources differentially affect microbiota, mTOR activity and transcription of mTOR signaling pathways in the small intestine
SK Kar, AJM Jansman, N Benis, J Ramiro-Garcia, D Schokker, L Kruijt, ...
PLoS One 12 (11), e0188282, 2017
Development of an enhanced chain elongation process for caproic acid production from waste-derived lactic acid and butyric acid
C orline Nzeteu, F Coelho, AC Trego, F Abram, J Ramiro-Garcia, L Paulo, ...
Journal of Cleaner Production 338, 130655, 2022
Microbial community redundancy and resilience underpins high-rate anaerobic treatment of dairy-processing wastewater at ambient temperatures
LM Paulo, J Castilla-Archilla, J Ramiro-Garcia, JA Escamez-Picón, ...
Frontiers in Bioengineering and Biotechnology 8, 192, 2020
Gene probing reveals the widespread distribution, diversity and abundance of isoprene-degrading bacteria in the environment
O Carrión, NL Larke-Mejía, L Gibson, M Farhan Ul Haque, ...
Microbiome 6, 1-11, 2018
Dechlorination of three tetrachlorobenzene isomers by contaminated harbor sludge-derived enrichment cultures follows thermodynamically favorable reactions
Y Lu, J Ramiro-Garcia, P Vandermeeren, S Herrmann, D Cichocka, ...
Applied Microbiology and Biotechnology 101, 2589-2601, 2017
Geochemical parameters and reductive dechlorination determine aerobic cometabolic vs aerobic metabolic vinyl chloride biodegradation at oxic/anoxic interface of hyporheic zones
S Atashgahi, Y Lu, J Ramiro-Garcia, P Peng, F Maphosa, D Sipkema, ...
Environmental Science & Technology 51 (3), 1626-1634, 2017
Metagenomic-and cultivation-based exploration of anaerobic chloroform biotransformation in hypersaline sediments as natural source of chloromethanes
P Peng, Y Lu, TNP Bosma, I Nijenhuis, B Nijsse, SA Shetty, A Ruecker, ...
Microorganisms 8 (5), 665, 2020
New Insights into Microbial Diversity of the Traditional Packed Table Olives Aloreña de Málaga through Metataxonomic Analysis
E López-García, A Benítez-Cabello, J Ramiro-García, V Romero-Gil, ...
Microorganisms 9 (3), 561, 2021
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