|Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis|
JV Olsen, M Vermeulen, A Santamaria, C Kumar, ML Miller, LJ Jensen, ...
Science signaling 3 (104), ra3-ra3, 2010
|Dynamic readers for 5-(hydroxy) methylcytosine and its oxidized derivatives|
CG Spruijt, F Gnerlich, AH Smits, T Pfaffeneder, PWTC Jansen, C Bauer, ...
Cell 152 (5), 1146-1159, 2013
|Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4|
M Vermeulen, KW Mulder, S Denissov, WWMP Pijnappel, ...
Cell 131 (1), 58-69, 2007
|Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers|
M Vermeulen, HC Eberl, F Matarese, H Marks, S Denissov, F Butter, ...
Cell 142 (6), 967-980, 2010
|Nucleosome-interacting proteins regulated by DNA and histone methylation|
T Bartke, M Vermeulen, B Xhemalce, SC Robson, M Mann, T Kouzarides
Cell 143 (3), 470-484, 2010
|Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila|
S Mendjan, M Taipale, J Kind, H Holz, P Gebhardt, M Schelder, ...
Molecular cell 21 (6), 811-823, 2006
|Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation|
A Kirmizis, H Santos-Rosa, CJ Penkett, MA Singer, M Vermeulen, M Mann, ...
Nature 449 (7164), 928-932, 2007
|MBD2/NuRD and MBD3/NuRD, two distinct complexes with different biochemical and functional properties|
X Le Guezennec, M Vermeulen, AB Brinkman, WAM Hoeijmakers, ...
Molecular and cellular biology 26 (3), 843-851, 2006
|Histone H2A monoubiquitination promotes histone H3 methylation in Polycomb repression|
R Kalb, S Latwiel, HI Baymaz, PWTC Jansen, CW Müller, M Vermeulen, ...
Nature structural & molecular biology 21 (6), 569-571, 2014
|SMYD3 links lysine methylation of MAP3K2 to Ras-driven cancer|
PK Mazur, N Reynoird, P Khatri, PWTC Jansen, AW Wilkinson, S Liu, ...
Nature 510 (7504), 283-287, 2014
|Iodoacetamide-induced artifact mimics ubiquitination in mass spectrometry|
ML Nielsen, M Vermeulen, T Bonaldi, J Cox, L Moroder, M Mann
Nature methods 5 (6), 459-460, 2008
|Tet oxidizes thymine to 5-hydroxymethyluracil in mouse embryonic stem cell DNA|
T Pfaffeneder, F Spada, M Wagner, C Brandmayr, SK Laube, D Eisen, ...
Nature chemical biology 10 (7), 574-581, 2014
|N 6-methyladenosine (m 6 A) recruits and repels proteins to regulate mRNA homeostasis|
RR Edupuganti, S Geiger, RGH Lindeboom, H Shi, PJ Hsu, Z Lu, ...
Nature structural & molecular biology 24 (10), 870-878, 2017
|Stoichiometry of chromatin-associated protein complexes revealed by label-free quantitative mass spectrometry-based proteomics|
AH Smits, PWTC Jansen, I Poser, AA Hyman, M Vermeulen
Nucleic acids research 41 (1), e28-e28, 2013
|Regulation of the histone H4 monomethylase PR-Set7 by CRL4Cdt2-mediated PCNA-dependent degradation during DNA damage|
H Oda, MR Hübner, DB Beck, M Vermeulen, J Hurwitz, DL Spector, ...
Molecular cell 40 (3), 364-376, 2010
|MicroRNA regulation of Cbx7 mediates a switch of Polycomb orthologs during ESC differentiation|
A O'Loghlen, AM Muñoz-Cabello, A Gaspar-Maia, HA Wu, A Banito, ...
Cell stem cell 10 (1), 33-46, 2012
|High confidence determination of specific protein–protein interactions using quantitative mass spectrometry|
M Vermeulen, NC Hubner, M Mann
Current opinion in biotechnology 19 (4), 331-337, 2008
|Quantitative dissection and stoichiometry determination of the human SET1/MLL histone methyltransferase complexes|
R van Nuland, AH Smits, P Pallaki, PWTC Jansen, M Vermeulen, ...
Molecular and cellular biology 33 (10), 2067-2077, 2013
|A map of general and specialized chromatin readers in mouse tissues generated by label-free interaction proteomics|
HC Eberl, CG Spruijt, CD Kelstrup, M Vermeulen, M Mann
Molecular cell 49 (2), 368-378, 2013
|Active DNA demethylation at enhancers during the vertebrate phylotypic period|
O Bogdanović, AH Smits, E de la Calle Mustienes, JJ Tena, E Ford, ...
Nature genetics 48 (4), 417-426, 2016