| Finishing the euchromatic sequence of the human genome International Human Genome Sequencing Consortium Nature 431 (7011), 931, 2004 | 3995 | 2004 |
| Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement AME Bruce J. Walker, Thomas Abeel, Terrance Shea, Margaret Priest, Amr ... PLoS One, 2014 | 2233 | 2014 |
| Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae JE Galagan, SE Calvo, C Cuomo, LJ Ma, JR Wortman, S Batzoglou, ... Nature 438 (7071), 1105-1115, 2005 | 1376 | 2005 |
| Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium LJ Ma, HC Van Der Does, KA Borkovich, JJ Coleman, MJ Daboussi, ... Nature 464 (7287), 367-373, 2010 | 1195 | 2010 |
| Evolution of pathogenicity and sexual reproduction in eight Candida genomes G Butler, MD Rasmussen, MF Lin, MAS Santos, S Sakthikumar, CA Munro, ... Nature 459 (7247), 657-662, 2009 | 902 | 2009 |
| The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization CA Cuomo, U Güldener, JR Xu, F Trail, BG Turgeon, A Di Pietro, ... Science 317 (5843), 1400-1402, 2007 | 795 | 2007 |
| Cleavage at a V (D) J recombination signal requires only RAG1 and RAG2 proteins and occurs in two steps JF McBlane, D van Gent, DA Ramsden, C Romeo, CA Cuomo, M Gellert, ... Cell 83 (3), 387-395, 1995 | 753 | 1995 |
| Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea J Amselem, CA Cuomo, JAL van Kan, M Viaud, EP Benito, A Couloux, ... PLoS Genet 7 (8), e1002230, 2011 | 734 | 2011 |
| DNA-dependent kinase (p350) as a candidate gene for the murine SCID defect CU Kirchgessner, CK Patil, JW Evans, CA Cuomo, LM Fried, T Carter, ... Science 267 (5201), 1178-1183, 1995 | 677 | 1995 |
| Simultaneous Emergence of Multidrug-Resistant Candida auris on 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses SR Lockhart, KA Etienne, S Vallabhaneni, J Farooqi, A Chowdhary, ... Clinical Infectious Diseases 64 (2), 134-140, 2017 | 581 | 2017 |
| Obligate biotrophy features unraveled by the genomic analysis of rust fungi S Duplessis, CA Cuomo, YC Lin, A Aerts, E Tisserant, C Veneault-Fourrey, ... Proceedings of the National Academy of Sciences 108 (22), 9166-9171, 2011 | 545 | 2011 |
| Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens SJ Klosterman, KV Subbarao, S Kang, P Veronese, SE Gold, ... PLoS pathog 7 (7), e1002137, 2011 | 362 | 2011 |
| Genomics of the fungal kingdom: insights into eukaryotic biology JE Galagan, MR Henn, LJ Ma, CA Cuomo, B Birren Genome research 15 (12), 1620-1631, 2005 | 311 | 2005 |
| Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication LJ Ma, AS Ibrahim, C Skory, MG Grabherr, G Burger, M Butler, M Elias, ... PLoS Genet 5 (7), e1000549, 2009 | 294 | 2009 |
| Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation G Janbon, KL Ormerod, D Paulet, EJ Byrnes III, V Yadav, G Chatterjee, ... PLoS Genet 10 (4), e1004261, 2014 | 263 | 2014 |
| Novel, panzootic and hybrid genotypes of amphibian chytridiomycosis associated with the bullfrog trade LM Schloegel, LF Toledo, JE Longcore, SE Greenspan, CA Vieira, M Lee, ... Molecular ecology 21 (21), 5162-5177, 2012 | 235 | 2012 |
| Rch1, a protein that specifically interacts with the RAG-1 recombination-activating protein CA Cuomo, SA Kirch, J Gyuris, R Brent, MA Oettinger Proceedings of the National Academy of Sciences 91 (13), 6156-6160, 1994 | 210 | 1994 |
| Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth CA Cuomo, CA Desjardins, MA Bakowski, J Goldberg, AT Ma, JJ Becnel, ... Genome research 22 (12), 2478-2488, 2012 | 205 | 2012 |
| The evolution of drug resistance in clinical isolates of Candida albicans AR Christopher B Ford, Jason M Funt, Darren Abbey, Luca Issi, Candace ... eLIFE 4, e00662, 2015 | 177 | 2015 |
| Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes M van het Hoog, TJ Rast, M Martchenko, S Grindle, D Dignard, H Hogues, ... Genome biology 8 (4), 1-11, 2007 | 173 | 2007 |
Jose F. MunozPostDoctoral Associate, Broad Institute of MIT & HarvardVerified email at broadinstitute.org
