Alain Coletta
Alain Coletta
InSilico Genomics
Verified email at insilicodb.org - Homepage
Title
Cited by
Cited by
Year
A survey on filter techniques for feature selection in gene expression microarray analysis
C Lazar, J Taminau, S Meganck, D Steenhoff, A Coletta, C Molter, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (4 …, 2012
3682012
Batch effect removal methods for microarray gene expression data integration: a survey
C Lazar, S Meganck, J Taminau, D Steenhoff, A Coletta, C Molter, ...
Briefings in bioinformatics 14 (4), 469-490, 2013
2002013
Low-complexity regions within protein sequences have position-dependent roles
A Coletta, JW Pinney, DYW Solís, J Marsh, SR Pettifer, TK Attwood
BMC systems biology 4 (1), 43, 2010
1842010
The PRINTS database: a fine-grained protein sequence annotation and analysis resource—its status in 2012
TK Attwood, A Coletta, G Muirhead, A Pavlopoulou, PB Philippou, I Popov, ...
Database 2012, 2012
1212012
Unlocking the potential of publicly available microarray data using inSilicoDb and inSilicoMerging R/Bioconductor packages
J Taminau, S Meganck, C Lazar, D Steenhoff, A Coletta, C Molter, ...
BMC bioinformatics 13 (1), 1-9, 2012
732012
InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor
A Coletta, C Molter, R Duqué, D Steenhoff, J Taminau, V De Schaetzen, ...
Genome biology 13 (11), R104, 2012
432012
inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO
J Taminau, D Steenhoff, A Coletta, S Meganck, C Lazar, V de Schaetzen, ...
Bioinformatics 27 (22), 3204-3205, 2011
362011
$^{\textrm {\small {my}}} $ Grid and UTOPIA: An Integrated Approach to Enacting and Visualising in Silico Experiments in the Life Sciences
S Pettifer, K Wolstencroft, P Alper, T Attwood, A Coletta, C Goble, P Li, ...
International Conference on Data Integration in the Life Sciences, 59-70, 2007
192007
Crowdsourced direct-to-consumer genomic analysis of a family quartet
M Corpas, W Valdivia-Granda, N Torres, B Greshake, A Coletta, A Knaus, ...
BMC genomics 16 (1), 1-16, 2015
152015
GENESHIFT: a nonparametric approach for integrating microarray gene expression data based on the inner product as a distance measure between the distributions of genes
C Lazar, J Taminau, S Meganck, D Steenhoff, A Coletta, DYW Solis, ...
IEEE/ACM transactions on computational biology and bioinformatics 10 (2 …, 2013
72013
Sequential application of feature selection and extraction for predicting breast cancer aggressiveness
J Taminau, S Meganck, C Lazar, DY Weiss-Solis, A Coletta, N Walker, ...
International Conference on Computational Systems-Biology and Bioinformatics …, 2010
22010
A complete public domain family genomics dataset
M Corpas, M Cariaso, A Coletta, D Weiss, A Harrison, F Moran, H Yang
BioRxiv, 000216, 2013
12013
InSilico DB: an online platform to collaboratively structure and export publicly available datasets from the Gene Expression Omnibus database
A Coletta, C Molter, R Duqué, D Steenhoff, J Taminau, V de Schaetzen, ...
Genome Biology 12 (1), 1-27, 2011
12011
BENCHMARKING PRE-PROCESSING AND BATCH EFFECT REMOVAL METHODS FOR INSILICO DB: GENOMICS BIG DATA INFRASTRUCTURE
Q De Clerck, A Nowe, A Coletta, D Sengupta
Bioinformatics: Integrating data, teams and disciplines 30, 30, 2014
2014
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Articles 1–14