Davi R. Ortega
Davi R. Ortega
California Institute of Technology / Laboratory for Research of Complex Systems
Geverifieerd e-mailadres voor caltech.edu - Homepage
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Universal architecture of bacterial chemoreceptor arrays
A Briegel, DR Ortega, EI Tocheva, K Wuichet, Z Li, S Chen, A Mller, ...
Proceedings of the National Academy of Sciences 106 (40), 17181-17186, 2009
Giant viruses with an expanded complement of translation system components
F Schulz, N Yutin, NN Ivanova, DR Ortega, TK Lee, J Vierheilig, H Daims, ...
Science 356 (6333), 82-85, 2017
Kilohertz-resolution spectroscopy of cold atoms with an optical frequency comb
TM Fortier, Y Le Coq, JE Stalnaker, D Ortega, SA Diddams, CW Oates, ...
Physical review letters 97 (16), 163905, 2006
Function of a chemotaxis-like signal transduction pathway in modulating motility, cell clumping, and cell length in the alphaproteobacterium Azospirillum brasilense
AN Bible, BB Stephens, DR Ortega, Z Xie, G Alexandre
Journal of bacteriology 190 (19), 6365-6375, 2008
The 3.2 resolution structure of a receptor: CheA: CheW signaling complex defines overlapping binding sites and key residue interactions within bacterial chemosensory arrays
X Li, AD Fleetwood, C Bayas, AM Bilwes, DR Ortega, JJ Falke, IB Zhulin, ...
Biochemistry 52 (22), 3852-3865, 2013
Structural conservation of chemotaxis machinery across A rchaea and B acteria
A Briegel, DR Ortega, AN Huang, CM Oikonomou, RP Gunsalus, ...
Environmental microbiology reports 7 (3), 414-419, 2015
In vivo structures of an intact type VI secretion system revealed by electron cryotomography
YW Chang, LA Rettberg, DR Ortega, GJ Jensen
EMBO reports 18 (7), 1090-1099, 2017
Sporulation, bacterial cell envelopes and the origin of life
EI Tocheva, DR Ortega, GJ Jensen
Nature Reviews Microbiology 14 (8), 535-542, 2016
Architecture of the Vibrio cholerae toxin-coregulated pilus machine revealed by electron cryotomography
YW Chang, A Kjr, DR Ortega, G Kovacikova, JA Sutherland, ...
Nature microbiology 2 (4), 1-7, 2017
A phenylalanine rotameric switch for signal-state control in bacterial chemoreceptors
DR Ortega, C Yang, P Ames, J Baudry, JS Parkinson, IB Zhulin
Nature communications 4 (1), 1-8, 2013
Assigning chemoreceptors to chemosensory pathways in Pseudomonas aeruginosa
DR Ortega, AD Fleetwood, T Krell, CS Harwood, GJ Jensen, IB Zhulin
Proceedings of the National Academy of Sciences 114 (48), 12809-12814, 2017
Chemotaxis cluster 1 proteins form cytoplasmic arrays in Vibrio cholerae and are stabilized by a double signaling domain receptor DosM
A Briegel, DR Ortega, P Mann, A Kjr, S Ringgaard, GJ Jensen
Proceedings of the National Academy of Sciences 113 (37), 10412-10417, 2016
CDvist: a webserver for identification and visualization of conserved domains in protein sequences
O Adebali, DR Ortega, IB Zhulin
Bioinformatics 31 (9), 1475-1477, 2015
Evolutionary genomics suggests that CheV is an additional adaptor for accommodating specific chemoreceptors within the chemotaxis signaling complex
DR Ortega, IB Zhulin
PLoS computational biology 12 (2), e1004723, 2016
MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems
VM Gumerov, DR Ortega, O Adebali, LE Ulrich, IB Zhulin
Nucleic acids research 48 (D1), D459-D464, 2020
Structure of the fission yeast actomyosin ring during constriction
MT Swulius, LT Nguyen, MS Ladinsky, DR Ortega, S Aich, M Mishra, ...
Proceedings of the National Academy of Sciences 115 (7), E1455-E1464, 2018
In situ imaging of the bacterial flagellar motor disassembly and assembly processes
M Kaplan, P Subramanian, D Ghosal, CM Oikonomou, S Pirbadian, ...
The EMBO journal 38 (14), e100957, 2019
The presence and absence of periplasmic rings in bacterial flagellar motors correlates with stator type
M Kaplan, D Ghosal, P Subramanian, CM Oikonomou, A Kjaer, ...
Elife 8, e43487, 2019
ETDB-Caltech: A blockchain-based distributed public database for electron tomography
DR Ortega, CM Oikonomou, HJ Ding, P Rees-Lee, Alexandria, GJ Jensen
PloS one 14 (4), e0215531, 2019
Conformational coupling between receptor and kinase binding sites through a conserved salt bridge in a signaling complex scaffold protein
DR Ortega, G Mo, K Lee, H Zhou, J Baudry, FW Dahlquist, IB Zhulin
PLoS Comput Biol 9 (11), e1003337, 2013
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