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The Centre for Integrative Bioinformatics VU (IBIVU)
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General secretion signal for the mycobacterial type VII secretion pathway
MH Daleke, R Ummels, P Bawono, J Heringa, ...
Proceedings of the National Academy of Sciences 109 (28), 11342-11347, 2012
2202012
PRALINE: a versatile multiple sequence alignment toolkit
P Bawono, J Heringa
Multiple Sequence Alignment Methods, 245-262, 2014
812014
Multiple sequence alignment
P Bawono, M Dijkstra, W Pirovano, A Feenstra, S Abeln, J Heringa
Bioinformatics: volume I: data, sequence analysis, and evolution, 167-189, 2017
572017
ConBind: motif-aware cross-species alignment for the identification of functional transcription factor binding sites
SH Lelieveld, J Schütte, MJJ Dijkstra, P Bawono, SJ Kinston, B Göttgens, ...
Nucleic acids research 44 (8), e72-e72, 2016
92016
Quantifying the displacement of mismatches in multiple sequence alignment benchmarks
P Bawono, A Van Der Velde, S Abeln, J Heringa
PloS one 10 (5), e0127431, 2015
82015
Motif-Aware PRALINE: Improving the alignment of motif regions
M Dijkstra, P Bawono, S Abeln, KA Feenstra, W Fokkink, J Heringa
PLoS computational biology 14 (11), e1006547, 2018
72018
Phylogenetic Analyses
P Bawono, J Heringa
Comprehensive Biomedical Physics 1, 4056, 2014
72014
a versatile multiple sequence alignment toolkit Methods Mol Biol
P Bawono, HJ PRALINE
Totowa, NJ: Humana Press 1079, 245-262, 2014
22014
Structural Property Prediction
JHM van Gils, M Dijkstra, P Bawono, J Gavaldá-Garciá, M Okounev, ...
arXiv preprint arXiv:2307.02172, 2023
2023
Structural Property Prediction
M Dijkstra, P Bawono, I Houtkamp, J Gavaldá-Garciá, M Okounev, ...
arXiv e-prints, arXiv: 2307.02172, 2023
2023
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Artikelen 1–10