Lex Overmars
Lex Overmars
University of Amsterdam
Verified email at radboudumc.nl
TitleCited byYear
Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?
WG Touw, JR Bayjanov, L Overmars, L Backus, J Boekhorst, M Wels, ...
Briefings in bioinformatics 14 (3), 315-326, 2012
2342012
Microbial diversity and biogeochemical cycling in soda lakes
DY Sorokin, T Berben, ED Melton, L Overmars, CD Vavourakis, G Muyzer
Extremophiles 18 (5), 791-809, 2014
1462014
Comparative analyses imply that the enigmatic Sigma factor 54 is a central controller of the bacterial exterior
C Francke, TG Kormelink, Y Hagemeijer, L Overmars, V Sluijter, ...
BMC genomics 12 (1), 385, 2011
792011
Classification of the adenylation and acyl-transferase activity of NRPS and PKS systems using ensembles of substrate specific hidden Markov models
BI Khayatt, L Overmars, RJ Siezen, C Francke
PLoS One 8 (4), e62136, 2013
622013
MGcV: the microbial genomic context viewer for comparative genome analysis
L Overmars, R Kerkhoven, RJ Siezen, C Francke
BMC genomics 14 (1), 209, 2013
462013
Transcriptomes reveal genetic signatures underlying physiological variations imposed by different fermentation conditions in Lactobacillus plantarum
PA Bron, M Wels, RS Bongers, H van Bokhorst-van de Veen, A Wiersma, ...
PLos one 7 (7), e38720, 2012
462012
Comparative genome analysis of central nitrogen metabolism and its control by GlnR in the class Bacilli
TG Kormelink, E Koenders, Y Hagemeijer, L Overmars, RJ Siezen, ...
BMC genomics 13 (1), 191, 2012
272012
Reconstruction of the regulatory network of Lactobacillus plantarum WCFS1 on basis of correlated gene expression and conserved regulatory motifs
M Wels, L Overmars, C Francke, M Kleerebezem, RJ Siezen
Microbial biotechnology 4 (3), 333-344, 2011
262011
CiVi: circular genome visualization with unique features to analyze sequence elements
L Overmars, SAFT van Hijum, RJ Siezen, C Francke
Bioinformatics 31 (17), 2867-2869, 2015
202015
Comparative genome analysis of three thiocyanate oxidizing Thioalkalivibrio species isolated from soda lakes
T Berben, L Overmars, DY Sorokin, G Muyzer
Frontiers in microbiology 8, 254, 2017
192017
Reduce manual curation by combining gene predictions from multiple annotation engines, a case study of start codon prediction
THA Ederveen, L Overmars, SAFT van Hijum
PLoS One 8 (5), e63523, 2013
182013
Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio
AC Ahn, JP Meier-Kolthoff, L Overmars, M Richter, T Woyke, DY Sorokin, ...
PLoS One 12 (3), e0173517, 2017
162017
Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2 T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes
ED Melton, DY Sorokin, L Overmars, O Chertkov, A Clum, M Pillay, ...
Standards in genomic sciences 11 (1), 67, 2016
92016
Draft genome sequence of Dethiobacter alkaliphilus strain AHT1 T, a gram-positive sulfidogenic polyextremophile
ED Melton, DY Sorokin, L Overmars, AL Lapidus, M Pillay, N Ivanova, ...
Standards in genomic sciences 12 (1), 57, 2017
52017
Metagenomic analysis shows the presence of bacteria related to free-living forms of sulfur-oxidizing chemolithoautotrophic symbionts in the rhizosphere of the seagrass Zostera …
C Cúcio, L Overmars, A Engelen, G Muyzer
Frontiers in Marine Science 5, 2018
42018
Diversity and distribution of sulfur oxidation-related genes in thioalkalivibrio, a genus of chemolithoautotrophic and haloalkaliphilic sulfur-oxidizing bacteria
T Berben, L Overmars, DY Sorokin, G Muyzer
Frontiers in microbiology 10, 160, 2019
32019
A novel quality measure and correction procedure for the annotation of microbial translation initiation sites
L Overmars, RJ Siezen, C Francke
PloS one 10 (7), e0133691, 2015
32015
The plasticity of prokaryotic regulatory elements
L Overmars
[Sl: sn], 2017
2017
Identification and global characterization of repeated sequences in prokaryotic genomes
L Overmars, SAFT van Hijum, RJ Siezen, C Francke
THE PLASTICITY OF PROKARYOTIC REGULATORY ELEMENTS, 57, 0
Repetitive Extragenic Palindromic elements have a common topological role in the reduction of transcriptional interference
L Overmars, SAFT van Hijum, RJ Siezen, C Francke
THE PLASTICITY OF PROKARYOTIC REGULATORY ELEMENTS, 89, 0
The system can't perform the operation now. Try again later.
Articles 1–20