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Lex Overmars
Lex Overmars
PostNL
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Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?
WG Touw, JR Bayjanov, L Overmars, L Backus, J Boekhorst, M Wels, ...
Briefings in bioinformatics 14 (3), 315-326, 2013
4632013
Microbial diversity and biogeochemical cycling in soda lakes
DY Sorokin, T Berben, ED Melton, L Overmars, CD Vavourakis, G Muyzer
Extremophiles 18, 791-809, 2014
3352014
Comparative analyses imply that the enigmatic Sigma factor 54 is a central controller of the bacterial exterior
C Francke, T Groot Kormelink, Y Hagemeijer, L Overmars, V Sluijter, ...
BMC genomics 12, 1-21, 2011
1292011
Classification of the adenylation and acyl-transferase activity of NRPS and PKS systems using ensembles of substrate specific hidden Markov models
BI Khayatt, L Overmars, RJ Siezen, C Francke
PLoS One 8 (4), e62136, 2013
1032013
MGcV: the microbial genomic context viewer for comparative genome analysis
L Overmars, R Kerkhoven, RJ Siezen, C Francke
BMC genomics 14, 1-9, 2013
702013
Diversity and Distribution of Sulfur Oxidation-Related Genes in Thioalkalivibrio, a Genus of Chemolithoautotrophic and Haloalkaliphilic Sulfur-Oxidizing Bacteria
T Berben, L Overmars, DY Sorokin, G Muyzer
Frontiers in Microbiology 10, 160, 2019
692019
Transcriptomes reveal genetic signatures underlying physiological variations imposed by different fermentation conditions in Lactobacillus plantarum
PA Bron, M Wels, RS Bongers, H van Bokhorst-van de Veen, A Wiersma, ...
PLos one 7 (7), e38720, 2012
632012
Comparative Genome Analysis of Three Thiocyanate Oxidizing Thioalkalivibrio Species Isolated from Soda Lakes
T Berben, L Overmars, DY Sorokin, G Muyzer
Frontiers in microbiology 8, 254, 2017
492017
Comparative genome analysis of central nitrogen metabolism and its control by GlnR in the class Bacilli
TG Kormelink, E Koenders, Y Hagemeijer, L Overmars, RJ Siezen, ...
BMC genomics 13, 1-16, 2012
472012
CiVi: circular genome visualization with unique features to analyze sequence elements
L Overmars, SAFT van Hijum, RJ Siezen, C Francke
Bioinformatics 31 (17), 2867-2869, 2015
452015
Metagenomic analysis shows the presence of bacteria related to free-living forms of sulfur-oxidizing chemolithoautotrophic symbionts in the rhizosphere of the seagrass Zostera …
C Cucio, L Overmars, AH Engelen, G Muyzer
Frontiers in Marine Science 5, 171, 2018
402018
Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio
AC Ahn, JP Meier-Kolthoff, L Overmars, M Richter, T Woyke, DY Sorokin, ...
PLoS One 12 (3), e0173517, 2017
372017
Reconstruction of the regulatory network of Lactobacillus plantarum WCFS1 on basis of correlated gene expression and conserved regulatory motifs
M Wels, L Overmars, C Francke, M Kleerebezem, RJ Siezen
Microbial Biotechnology 4 (3), 333-344, 2011
352011
Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes
ED Melton, DY Sorokin, L Overmars, O Chertkov, A Clum, M Pillay, ...
Standards in genomic sciences 11, 1-9, 2016
342016
Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile
ED Melton, DY Sorokin, L Overmars, AL Lapidus, M Pillay, N Ivanova, ...
Standards in genomic sciences 12, 1-9, 2017
212017
Reduce manual curation by combining gene predictions from multiple annotation engines, a case study of start codon prediction
THA Ederveen, L Overmars, SAFT van Hijum
PLoS One 8 (5), e63523, 2013
202013
A novel quality measure and correction procedure for the annotation of microbial translation initiation sites
L Overmars, RJ Siezen, C Francke
PloS One 10 (7), e0133691, 2015
62015
Identification and global characterization of repeated sequences in prokaryotic genomes
L Overmars, SA van Hijum, RJ Siezen, C Francke
THE PLASTICITY OF PROKARYOTIC REGULATORY ELEMENTS 57, 0
1
Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive
ED Melton, DY Sorokin, L Overmars
Standards in Genomic Sciences, 12 (1), 2017
2017
The plasticity of prokaryotic regulatory elements
L Overmars
sl: sn, 2017
2017
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Artikelen 1–20