ENL links histone acetylation to oncogenic gene expression in acute myeloid leukaemia L Wan, H Wen, Y Li, J Lyu, Y Xi, T Hoshii, JK Joseph, X Wang, YHE Loh, ... Nature 543 (7644), 265-269, 2017 | 256 | 2017 |
QDMR: a quantitative method for identification of differentially methylated regions by entropy Y Zhang, H Liu, J Lv, X Xiao, J Zhu, X Liu, J Su, X Li, Q Wu, F Wang, Y Cui Nucleic acids research 39 (9), e58-e58, 2011 | 152 | 2011 |
DiseaseMeth version 2.0: a major expansion and update of the human disease methylation database Y Xiong, Y Wei, Y Gu, S Zhang, J Lyu, B Zhang, C Chen, J Zhu, Y Wang, ... Nucleic acids research 45 (D1), D888-D895, 2017 | 138 | 2017 |
YEATS2 links histone acetylation to tumorigenesis of non-small cell lung cancer W Mi, H Guan, J Lyu, D Zhao, Y Xi, S Jiang, FH Andrews, X Wang, ... Nature communications 8 (1), 1088, 2017 | 132 | 2017 |
Recognition of histone acetylation by the GAS41 YEATS domain promotes H2A. Z deposition in non-small cell lung cancer CC Hsu, J Shi, C Yuan, D Zhao, S Jiang, J Lyu, X Wang, H Li, H Wen, ... Genes & development 32 (1), 58-69, 2018 | 120 | 2018 |
DiseaseMeth: a human disease methylation database J Lv, H Liu, J Su, X Wu, H Liu, B Li, X Xiao, F Wang, Q Wu, Y Zhang Nucleic acids research 40 (D1), D1030-D1035, 2012 | 115 | 2012 |
Homeobox oncogene activation by pan-cancer DNA hypermethylation J Su, YH Huang, X Cui, X Wang, X Zhang, Y Lei, J Xu, X Lin, K Chen, J Lv, ... Genome biology 19, 1-12, 2018 | 114 | 2018 |
HHMD: the human histone modification database Y Zhang, J Lv, H Liu, J Zhu, J Su, Q Wu, Y Qi, F Wang, X Li Nucleic acids research 38 (suppl_1), D149-D154, 2010 | 103 | 2010 |
Systematic identification and annotation of human methylation marks based on bisulfite sequencing methylomes reveals distinct roles of cell type-specific hypomethylation in the … H Liu, X Liu, S Zhang, J Lv, S Li, S Shang, S Jia, Y Wei, F Wang, J Su, ... Nucleic acids research 44 (1), 75-94, 2016 | 87 | 2016 |
Gene function and cell surface protein association analysis based on single-cell multiomics data H Hu, Z Feng, H Lin, J Cheng, J Lyu, Y Zhang, J Zhao, F Xu, T Lin, Q Zhao, ... Computers in Biology and Medicine 157, 106733, 2023 | 80 | 2023 |
Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation BJ Klein, SM Jang, C Lachance, W Mi, J Lyu, S Sakuraba, K Krajewski, ... Nature communications 10 (1), 4724, 2019 | 77 | 2019 |
Long non-coding RNA identification over mouse brain development by integrative modeling of chromatin and genomic features J Lv, H Liu, Z Huang, J Su, H He, Y Xiu, Y Zhang, Q Wu Nucleic acids research 41 (22), 10044-10061, 2013 | 73 | 2013 |
CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing data J Su, H Yan, Y Wei, H Liu, H Liu, F Wang, J Lv, Q Wu, Y Zhang Nucleic acids research 41 (1), e4-e4, 2013 | 67 | 2013 |
Identification and characterization of long non-coding RNAs related to mouse embryonic brain development from available transcriptomic data J Lv, W Cui, H Liu, H He, Y Xiu, J Guo, H Liu, Q Liu, T Zeng, Y Chen, ... PloS one 8 (8), e71152, 2013 | 62 | 2013 |
A click chemistry approach reveals the chromatin-dependent histone H3K36 deacylase nature of SIRT7 WW Wang, M Angulo-Ibanez, J Lyu, Y Kurra, Z Tong, B Wu, L Zhang, ... Journal of the American Chemical Society 141 (6), 2462-2473, 2019 | 61 | 2019 |
The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation W Mi, Y Zhang, J Lyu, X Wang, Q Tong, D Peng, Y Xue, AH Tencer, ... Nature communications 9 (1), 3759, 2018 | 61 | 2018 |
Rice protein improves adiposity, body weight and reduces lipids level in rats through modification of triglyceride metabolism L Yang, JH Chen, J Lv, Q Wu, T Xu, H Zhang, QH Liu, HK Yang Lipids in health and disease 11, 1-10, 2012 | 61 | 2012 |
CpG_MI: a novel approach for identifying functional CpG islands in mammalian genomes J Su, Y Zhang, J Lv, H Liu, X Tang, F Wang, Y Qi, Y Feng, X Li Nucleic acids research 38 (1), e6-e6, 2010 | 56 | 2010 |
Covalent modifications of histone H3K9 promote binding of CHD3 AH Tencer, KL Cox, L Di, JB Bridgers, J Lyu, X Wang, JK Sims, ... Cell reports 21 (2), 455-466, 2017 | 46 | 2017 |
DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features J Lyu, JJ Li, J Su, F Peng, YE Chen, X Ge, W Li Science advances 6 (46), eaba6784, 2020 | 44 | 2020 |