Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 17394 | 2019 |
Functional overlap of the Arabidopsis leaf and root microbiota Y Bai, DB Müller, G Srinivas, R Garrido-Oter, E Potthoff, M Rott, ... Nature 528 (7582), 364-369, 2015 | 1216 | 2015 |
NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice J Zhang, YX Liu, N Zhang, B Hu, T Jin, H Xu, Y Qin, P Yan, X Zhang, ... Nature biotechnology 37 (6), 676-684, 2019 | 837 | 2019 |
Core microbiomes for sustainable agroecosystems H Toju, KG Peay, M Yamamichi, K Narisawa, K Hiruma, K Naito, S Fukuda, ... Nature plants 4 (5), 247-257, 2018 | 807 | 2018 |
Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017 | 803 | 2017 |
The plant microbiota: systems-level insights and perspectives DB Müller, C Vogel, Y Bai, JA Vorholt Annual review of genetics 50 (1), 211-234, 2016 | 765 | 2016 |
A specialized metabolic network selectively modulates Arabidopsis root microbiota AC Huang, T Jiang, YX Liu, YC Bai, J Reed, B Qu, A Goossens, ... Science 364 (6440), eaau6389, 2019 | 638 | 2019 |
A practical guide to amplicon and metagenomic analysis of microbiome data YX Liu, Y Qin, T Chen, M Lu, X Qian, X Guo, Y Bai Protein & cell 12 (5), 315-330, 2021 | 623 | 2021 |
Root exudates drive the soil-borne legacy of aboveground pathogen infection J Yuan, J Zhao, T Wen, M Zhao, R Li, P Goossens, Q Huang, Y Bai, ... Microbiome 6, 1-12, 2018 | 482 | 2018 |
Plant-derived coumarins shape the composition of an Arabidopsis synthetic root microbiome MJ Voges, Y Bai, P Schulze-Lefert, ES Sattely Proceedings of the National Academy of Sciences 116 (25), 12558-12565, 2019 | 408 | 2019 |
Soil pH correlates with the co-occurrence and assemblage process of diazotrophic communities in rhizosphere and bulk soils of wheat fields K Fan, P Weisenhorn, JA Gilbert, Y Shi, Y Bai, H Chu Soil Biology and Biochemistry 121, 185-192, 2018 | 320 | 2018 |
Expression of the Nitrate Transporter Gene OsNRT1.1A/OsNPF6.3 Confers High Yield and Early Maturation in Rice W Wang, B Hu, D Yuan, Y Liu, R Che, Y Hu, S Ou, Y Liu, Z Zhang, ... The Plant Cell 30 (3), 638-651, 2018 | 296 | 2018 |
Root microbiota shift in rice correlates with resident time in the field and developmental stage J Zhang, N Zhang, YX Liu, X Zhang, B Hu, Y Qin, H Xu, H Wang, X Guo, ... Science China Life Sciences 61, 613-621, 2018 | 266 | 2018 |
Variation in rhizosphere microbial communities and its association with the symbiotic efficiency of rhizobia in soybean Q Han, Q Ma, Y Chen, B Tian, L Xu, Y Bai, W Chen, X Li The ISME journal 14 (8), 1915-1928, 2020 | 238 | 2020 |
Rhizobacterial volatiles and photosynthesis‐related signals coordinate MYB72 expression in Arabidopsis roots during onset of induced systemic resistance and … C Zamioudis, J Korteland, JA Van Pelt, M van Hamersveld, N Dombrowski, ... The Plant Journal 84 (2), 309-322, 2015 | 234 | 2015 |
The root microbiome: Community assembly and its contributions to plant fitness B Bai, W Liu, X Qiu, J Zhang, J Zhang, Y Bai Journal of Integrative Plant Biology 64 (2), 230-243, 2022 | 211 | 2022 |
High-throughput cultivation and identification of bacteria from the plant root microbiota J Zhang, YX Liu, X Guo, Y Qin, R Garrido-Oter, P Schulze-Lefert, Y Bai Nature Protocols 16 (2), 988-1012, 2021 | 165 | 2021 |
Scale effects on the relationships between land characteristics and ecosystem services-a case study in Taihu Lake Basin, China Y Bai, Y Chen, JM Alatalo, Z Yang, B Jiang Science of the Total Environment 716, 137083, 2020 | 151 | 2020 |
Reductionist synthetic community approaches in root microbiome research YX Liu, Y Qin, Y Bai Current Opinion in Microbiology 49, 97-102, 2019 | 136 | 2019 |
Taxonomic structure and functional association of foxtail millet root microbiome T Jin, Y Wang, Y Huang, J Xu, P Zhang, N Wang, X Liu, H Chu, G Liu, ... Gigascience 6 (10), 1-12, 2017 | 98 | 2017 |