Extensive sequencing of seven human genomes to characterize benchmark reference materials JM Zook, D Catoe, J McDaniel, L Vang, N Spies, A Sidow, Z Weng, Y Liu, ... Scientific data 3 (1), 1-26, 2016 | 750 | 2016 |
Nanopore DNA sequencing and genome assembly on the International Space Station SL Castro-Wallace, CY Chiu, KK John, SE Stahl, KH Rubins, ... Scientific reports 7 (1), 18022, 2017 | 401 | 2017 |
Comprehensive benchmarking and ensemble approaches for metagenomic classifiers ABR McIntyre, R Ounit, E Afshinnekoo, RJ Prill, E Hénaff, N Alexander, ... Genome biology 18, 1-19, 2017 | 344 | 2017 |
A robust benchmark for detection of germline large deletions and insertions JM Zook, NF Hansen, ND Olson, L Chapman, JC Mullikin, C Xiao, ... Nature biotechnology 38 (11), 1347-1355, 2020 | 334 | 2020 |
Single-molecule sequencing detection of N6-methyladenine in microbial reference materials ABR McIntyre, N Alexander, K Grigorev, D Bezdan, H Sichtig, CY Chiu, ... Nature communications 10 (1), 579, 2019 | 158 | 2019 |
Nanopore sequencing in microgravity ABR McIntyre, L Rizzardi, AM Yu, N Alexander, GL Rosen, DJ Botkin, ... npj Microgravity 2 (1), 1-9, 2016 | 80 | 2016 |
A robust benchmark for germline structural variant detection JM Zook, NF Hansen, ND Olson, LM Chapman, JC Mullikin, C Xiao, ... BioRxiv, 664623, 2019 | 68 | 2019 |
Rapid antigen diversification through mitotic recombination in the human malaria parasite Plasmodium falciparum X Zhang, N Alexander, I Leonardi, C Mason, LA Kirkman, KW Deitsch PLoS biology 17 (5), e3000271, 2019 | 53 | 2019 |
Genome Sequence and Analysis of Escherichia coli MRE600, a Colicinogenic, Nonmotile Strain that Lacks RNase I and the Type I Methyltransferase, EcoKI CM Kurylo, N Alexander, RA Dass, MM Parks, RA Altman, CT Vincent, ... Genome biology and evolution 8 (3), 742-752, 2016 | 50 | 2016 |
Chromosome End Repair and Genome Stability in Plasmodium falciparum SF Calhoun, J Reed, N Alexander, CE Mason, KW Deitsch, LA Kirkman MBio 8 (4), 10.1128/mbio. 00547-17, 2017 | 30 | 2017 |
Nanopore detection of bacterial DNA base modifications ABR McIntyre, N Alexander, AS Burton, S Castro-Wallace, CY Chiu, ... bioRxiv, 127100, 2017 | 14 | 2017 |
RP58 represses transcriptional programs linked to nonneuronal cell identity and glioblastoma subtypes in developing neurons C Xiang, KK Frietze, Y Bi, Y Li, V Dal Pozzo, S Pal, N Alexander, V Baubet, ... Molecular and cellular biology 41 (7), e00526-20, 2021 | 11 | 2021 |
A crowdsourced set of curated structural variants for the human genome LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ... PLoS computational biology 16 (6), e1007933, 2020 | 7 | 2020 |
Single-cell eQTL mapping in yeast reveals a tradeoff between growth and reproduction J Boocock, N Alexander, LA Tapia, L Walter-McNeill, SP Patel, ... bioRxiv, 2023.12. 07.570640, 2024 | 5 | 2024 |
SVCurator: a crowdsourcing app to visualize evidence of structural variants for the human genome LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ... BioRxiv, 581264, 2019 | 4 | 2019 |
Genomic epidemiology of the Los Angeles COVID-19 outbreak and the early history of the B. 1.43 strain in the USA L Guo, J Boocock, EE Hilt, S Chandrasekaran, Y Zhang, C Munugala, ... BMC genomics 23 (1), 260, 2022 | 3 | 2022 |
Author Correction: A robust benchmark for detection of germline large deletions and insertions JM Zook, NF Hansen, ND Olson, L Chapman, JC Mullikin, C Xiao, ... Nature biotechnology 38 (11), 1357-1357, 2020 | 3 | 2020 |
A maternal-effect toxin-antidote element causes larval arrest in C. elegans S Zdraljevic, L Walter-McNeill, G Bruni, JS Bloom, DHW Leighton, ... bioRxiv, 2024.04. 26.591160, 2024 | 2 | 2024 |
Genomic epidemiology of the Los Angeles COVID-19 outbreak L Guo, J Boocock, EE Hilt, S Chandrasekaran, Y Zhang, C Munugala, ... medRxiv, 2020.09. 15.20194712, 2020 | 1 | 2020 |
Divergent C. elegans toxin alleles are suppressed by distinct mechanisms S Zdraljevic, L Walter-McNeill, GN Bruni, JS Bloom, DHW Leighton, ... bioRxiv, 2024 | | 2024 |