Nervous system regionalization entails axial allocation before neural differentiation V Metzis, S Steinhauser, E Pakanavicius, M Gouti, D Stamataki, ... Cell 175 (4), 1105-1118. e17, 2018 | 148 | 2018 |
A comprehensive comparison of tools for differential ChIP-seq analysis S Steinhauser, N Kurzawa, R Eils, C Herrmann Briefings in bioinformatics, bbv110, 2016 | 133 | 2016 |
ShinyButchR: Interactive NMF-based decomposition workflow of genome-scale datasets A Quintero, D Hübschmann, N Kurzawa, S Steinhauser, P Rentzsch, ... Biology Methods and Protocols 5 (1), bpaa022, 2020 | 14 | 2020 |
Chromatin-contact atlas reveals disorder-mediated protein interactions and moonlighting chromatin-associated RBPs MR Rafiee, JA Zagalak, S Sidorov, S Steinhauser, K Davey, J Ule, ... Nucleic Acids Research 49 (22), 13092-13107, 2021 | 12 | 2021 |
Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers D Hüebschmann, N Kurzawa, S Steinhauser, P Rentzsch, S Krämer, ... bioRxiv, 199547, 2017 | 8 | 2017 |
ChromWave: Deciphering the DNA-encoded competition between transcription factors and nucleosomes with deep neural networks SA Cakiroglu, S Steinhauser, J Smith, W Xing, NM Luscombe BioRxiv, 2021.03. 19.436198, 2021 | 2 | 2021 |
SPACE exploration of chromatin proteome to reveal associated RNA-binding proteins MR Rafiee, JA Zagalak, S Sidorov, S Steinhauser, K Davey, J Ule, ... Cold Spring Harbor Laboratory 13, 2020, 2020 | 2 | 2020 |
Epiblast morphogenesis is controlled by selective mRNA decay triggered by LIN28A relocation M Modic, IR de Los Mozos, S Steinhauser, E van Genderen, S Schirge, ... bioRxiv, 2021.03. 15.433780, 2021 | 1 | 2021 |
Benchmarking tools for transcription factor prioritization LS Santana, A Reyes, S Hoersch, E Ferrero, C Kolter, S Gaulis, ... Computational and Structural Biotechnology Journal, 2024 | | 2024 |
Benchmarking tools for transcription factor prioritization L Schubert Santana, A Reyes, S Hoersch, E Ferrero, C Kolter, S Gaulis, ... bioRxiv, 2024.04. 23.590206, 2024 | | 2024 |
The transcription factor ZNF469 regulates collagen production in liver fibrosis S Steinhauser, D Estoppey, DP Buehler, Y Xiong, N Pizzato, A Rietsch, ... bioRxiv, 2024.04. 25.591188, 2024 | | 2024 |
Poised PABP-RNA hubs implement signal-dependent mRNA decay in development J Ule, M Modic, K Kuret, S Steinhauser, R Faraway, E van Genderen, ... | | 2023 |
MYCN mediates cysteine addiction and sensitizes to ferroptosis H Alborzinia, AF Flórez, S Gogolin, LM Brückner, C Shao, M Gartlgruber, ... bioRxiv, 2021.08. 10.455675, 2021 | | 2021 |
Investigation of the gene regulatory logic encoded in genome sequences using machine learning S Steinhauser Imperial College London, 2020 | | 2020 |
Regionalization of the nervous system requires axial allocation prior to neural lineage commitment V Metzis, S Steinhauser, E Pakanavicius, M Gouti, D Stamataki, ... bioRxiv, 229203, 2017 | | 2017 |
Activation of proto-oncogenes by enhancer-hijacking in high‐risk neuroblastoma D Dreidax, M Gartlgruber, S Steinhauser, L Savelyeva, R Schwessinger, ... Cancer Research 77 (13_Supplement), 1023-1023, 2017 | | 2017 |
Abstract LB-083: Core transcriptional regulatory circuitries in neuroblastoma M Gartlgruber, D Dreidax, D Doncevic, S Steinhauser, S Gröschel, ... Cancer Research 77 (13_Supplement), LB-083-LB-083, 2017 | | 2017 |
A Moonlighting Function of Aldh18a1 Supports Pausing RNA Polymerase II in Promoter-Proximal Regions MR Rafiee, S Rohban, K Davey, S Steinhauser, J Krijgsveld, J Ule, ... Available at SSRN 4087712, 0 | | |