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Dmitry Svetlichnyy
Dmitry Svetlichnyy
Centre for Strategic Planning
Verified email at cspfmba.ru
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Cited by
Year
iRegulon: from a gene list to a gene regulatory network using large motif and track collections
R Janky, A Verfaillie, H Imrichová, B Van de Sande, L Standaert, ...
PLoS computational biology 10 (7), e1003731, 2014
7892014
Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state
A Verfaillie, H Imrichova, ZK Atak, M Dewaele, F Rambow, G Hulselmans, ...
Nature communications 6 (1), 6683, 2015
4122015
Coupled scRNA-seq and intracellular protein activity reveal an immunosuppressive role of TREM2 in cancer
Y Katzenelenbogen, F Sheban, A Yalin, I Yofe, D Svetlichnyy, DA Jaitin, ...
Cell 182 (4), 872-885. e19, 2020
3312020
Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic
A Verfaillie, D Svetlichnyy, H Imrichova, K Davie, M Fiers, ZK Atak, ...
Genome research 26 (7), 882-895, 2016
772016
Identification of High-Impact cis-Regulatory Mutations Using Transcription Factor Specific Random Forest Models
D Svetlichnyy, H Imrichova, M Fiers, Z Kalender Atak, S Aerts
PLoS computational biology 11 (11), e1004590, 2015
282015
Systems pharmacology models can be used to understand complex pharmacokinetic‐pharmacodynamic behavior: an example using 5‐lipoxygenase inhibitors
O Demin, T Karelina, D Svetlichniy, E Metelkin, G Speshilov, O Demin Jr, ...
CPT: Pharmacometrics & Systems Pharmacology 2 (9), 1-9, 2013
262013
Identification of cis-regulatory mutations generating de novo edges in personalized cancer gene regulatory networks
Z Kalender Atak, H Imrichova, D Svetlichnyy, G Hulselmans, V Christiaens, ...
Genome Medicine 9, 1-13, 2017
162017
ACE-inhibition induces a cardioprotective transcriptional response in the metabolic syndrome heart
PCPH Aziza Yakubova, Lieven Thorrez, Dmitry Svetlichnyy, Liesbeth Zwarts ...
Scientific reports, 2018
102018
Regulation of leukotriene and 5oxoETE synthesis and the effect of 5-lipoxygenase inhibitors: a mathematical modeling approach
TA Karelina, KV Zhudenkov, OO Demin, DV Svetlichny, B Agoram, ...
BMC systems biology 6, 1-14, 2012
102012
Single-Cell Gene Expression Analysis Revealed Immune Cell Signatures of Delta COVID-19
AM Shaymardanov, OA Antonova, AD Sokol, KA Deinichenko, ...
Cells 11 (19), 2950, 2022
12022
Single-Cell Gene Expression Analysis Revealed Immune Cell Signatures of Delta COVID-19.
AM Shaymardanov, OA Antonova, AD Sokol, KA Deinichenko, ...
Cells 11 (19), 2950-2950, 2022
2022
Diminished preconditioning potential in the hearts from metabolic syndrome subjects can be partially restored by angiotensin-converting-enzyme inhibitor therapy
A Yakubova, L Thorrez, D Svetlichnyy, G Van Der Mieren, W Oosterlinck, ...
European Heart Journal 39, 1363-1363, 2018
2018
P6446 Diminished preconditioning potential in the hearts from metabolic syndrome subjects can be partially restored by angiotensin-converting-enzyme inhibitor therapy
A Yakubova, L Thorrez, D Svetlichnyy, G Van Der Mieren, W Oosterlinck, ...
European Heart Journal 39 (suppl_1), ehy566. P6446, 2018
2018
Approaches to building spatio-temporal models of splicing regulation that include RNA structure
D Svetlichnyy, D Pervouchine
Moscow Conference on Computational Molecular Biology (MCCMB 2017), 72-72, 2017
2017
IDENTIFICATION OF CIS-REGULATORY MODULES AND NON-CODING VARIATION USING MACHINE LEARNING METHODS
D Svetlichnyy
2016
Directly linking non-coding SNPs to changes in epithelial enhancer activity
J Jacobs, I Taskiran, G Paciello
EMBL Transcription and Chromatin Proceedings, 2016
2016
ESTIMATING THE IMPACT OF CIS-REGULATORY VARIATION IN CANCER GENOMES USING ENHANCER PREDICTION MODELS AND MATCHED GENOME-EPIGENOME-TRANSCRIPTOME DATA
D Svetlichnyy, I Hana, KA Zeynep, S Aerts
10th Benelux Bioinformatics Conference, Location: Antwerp, Belgium, 2015
2015
A novel High-throughput Enhancer reporter assay reveals unsophisticated p53 enhancer logic
A Verfaillie, K Davie, D Svetlichnyy, M Fiers, S Aerts
Functional Genomics and Systems Biology, Date: 2015/10/28-2015/10/30 …, 2015
2015
Estimating the impact of cis-regulatory variation in cancer genomes using enhancer prediction models and matched genome-epigenome-transcriptome data
H Imrichova, Z Kalender Atak, D Svetlichnyy, J Reumers, H Ceulemans, ...
Functional Genomics and Systems Biology: From Model Organisms to Human …, 2015
2015
Melanoma transcriptome and chromatin profiling identifies a proliferative SOX10/MITF gene network and an AP-1/TEADs invasive network
H Imrichova, A Verfaillie, Z Kalender Atak, C Herrmann, G Hulselmans, ...
EMBO Conference:, 2014
2014
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