Paschalia Kapli
Paschalia Kapli
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A general species delimitation method with applications to phylogenetic placements
J Zhang, P Kapli, P Pavlidis, A Stamatakis
Bioinformatics 29 (22), 2869-2876, 2013
Phylogenomics resolves the timing and pattern of insect evolution
B Misof, S Liu, K Meusemann, RS Peters, A Donath, C Mayer, ...
Science 346 (6210), 763-767, 2014
Multi-rate Poisson tree processes for single-locus species delimitation under maximum likelihood and Markov chain Monte Carlo
P Kapli, S Lutteropp, J Zhang, K Kobert, P Pavlidis, A Stamatakis, T Flouri
Bioinformatics 33 (11), 1630-1638, 2017
Phylogenetic tree building in the genomic age
P Kapli, Z Yang, MJ Telford
Nature Reviews Genetics 21 (7), 428-444, 2020
Evolutionary history of Polyneoptera and its implications for our understanding of early winged insects
B Wipfler, H Letsch, PB Frandsen, P Kapli, C Mayer, D Bartel, TR Buckley, ...
Proceedings of the National Academy of Sciences 116 (8), 3024-3029, 2019
A review of phylogeographic analyses of animal taxa from the Aegean and surrounding regions
N Poulakakis, P Kapli, P Lymberakis, A Trichas, K Vardinoyiannis, ...
Journal of Zoological Systematics and Evolutionary Research 53 (1), 18-32, 2015
Topology-dependent asymmetry in systematic errors affects phylogenetic placement of Ctenophora and Xenacoelomorpha
P Kapli, MJ Telford
Science advances 6 (50), eabc5162, 2020
Response to Comment on “Phylogenomics resolves the timing and pattern of insect evolution"
KM Kjer, JL Ware, A Blanke, A Donath, T Flouri, PB Frandsen, P Kapli, ...
Science 349 (6247), 487, 2015
Molecular phylogeny and historical biogeography of the Anatolian lizard Apathya (Squamata, Lacertidae)
P Kapli, D Botoni, Ilgaz, Y Kumlutaş, A Avcı, N Rastegar-Pouyani, ...
Molecular Phylogenetics and Evolution 66 (3), 992-1001, 2013
An integrative phylogenomic approach to elucidate the evolutionary history and divergence times of Neuropterida (Insecta: Holometabola)
A Vasilikopoulos, B Misof, K Meusemann, D Lieberz, T Flouri, RG Beutel, ...
BMC Evolutionary Biology 20, 1-24, 2020
Lack of support for Deuterostomia prompts reinterpretation of the first Bilateria
P Kapli, P Natsidis, DJ Leite, M Fursman, N Jeffrie, IA Rahman, H Philippe, ...
Science advances 7 (12), eabe2741, 2021
Using more than the oldest fossils: dating Osmundaceae with three Bayesian clock approaches
GW Grimm, P Kapli, B Bomfleur, S McLoughlin, SS Renner
Systematic Biology 64 (3), 396-405, 2015
Species relationships and divergence times in beeches: new insights from the inclusion of 53 young and old fossils in a birth–death clock model
SS Renner, GW Grimm, P Kapli, T Denk
Philosophical Transactions of the Royal Society B: Biological Sciences 371…, 2016
Comparative phylogeography of six herpetofauna species in Cyprus: late Miocene to Pleistocene colonization routes
N Poulakakis, P Kapli, A Kardamaki, E Skourtanioti, B Gcmen, Ilgaz, ...
Biological Journal of the Linnean Society 108 (3), 619-635, 2013
Molecular phylogeny of three Mesalina (Reptilia: Lacertidae) species (M. guttulata, M. brevirostris and M. bahaeldini) from North Africa and the Middle East: Another case of…
P Kapli, P Lymberakis, N Poulakakis, G Mantziou, A Parmakelis, ...
Molecular phylogenetics and evolution 49 (1), 102-110, 2008
A reinvestigation of phylogeny and divergence times of the Ablepharus kitaibelii species complex (Sauria, Scincidae) based on mtDNA and nuDNA genes
E Skourtanioti, P Kapli, Ilgaz, Y Kumlutaş, A Avcı, F Ahmadzadeh, ...
Molecular Phylogenetics and Evolution 103, 199-214, 2016
Separate histories in both sides of the Mediterranean: phylogeny and niche evolution of ocellated lizards
F Ahmadzadeh, M Flecks, MA Carretero, W Bhme, F Ihlow, P Kapli, ...
Journal of Biogeography 43 (6), 1242-1253, 2016
Historical biogeography of the lacertid lizard Mesalina in North Africa and the Middle East
P Kapli, P Lymberakis, PA Crochet, P Geniez, JC Brito, M Almutairi, ...
Journal of Biogeography 42 (2), 267-279, 2015
Beginner's guide on the use of PAML to detect positive selection
S lvarez-Carretero, P Kapli, Z Yang
Molecular biology and evolution 40 (4), msad041, 2023
Systematic errors in phylogenetic trees
P Kapli, T Flouri, MJ Telford
Current Biology 31 (2), R59-R64, 2021
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