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Jayanta Mukopadhyay
Jayanta Mukopadhyay
Verified email at jcbose.ac.in - Homepage
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Cited by
Year
Accurate FRET measurements within single diffusing biomolecules using alternating-laser excitation
NK Lee, AN Kapanidis, Y Wang, X Michalet, J Mukhopadhyay, RH Ebright, ...
Biophysical journal 88 (4), 2939-2953, 2005
5602005
Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex
V Mekler, E Kortkhonjia, J Mukhopadhyay, J Knight, A Revyakin, ...
Cell 108 (5), 599-614, 2002
3482002
The RNA polymerase “switch region” is a target for inhibitors
J Mukhopadhyay, K Das, S Ismail, D Koppstein, M Jang, B Hudson, ...
Cell 135 (2), 295-307, 2008
2752008
Translocation of σ70 with RNA polymerase during transcription: fluorescence resonance energy transfer assay for movement relative to DNA
J Mukhopadhyay, AN Kapanidis, V Mekler, E Kortkhonjia, YW Ebright, ...
Cell 106 (4), 453-463, 2001
2522001
Antibacterial peptide microcin J25 inhibits transcription by binding within and obstructing the RNA polymerase secondary channel
J Mukhopadhyay, E Sineva, J Knight, RM Levy, RH Ebright
Molecular cell 14 (6), 739-751, 2004
2512004
Structure of antibacterial peptide microcin J25: a 21-residue lariat protoknot
MJ Bayro, J Mukhopadhyay, GVT Swapna, JY Huang, LC Ma, E Sineva, ...
Journal of the American Chemical Society 125 (41), 12382-12383, 2003
2372003
Inhibition of bacterial RNA polymerase by streptolydigin: stabilization of a straight-bridge-helix active-center conformation
S Tuske, SG Sarafianos, X Wang, B Hudson, E Sineva, J Mukhopadhyay, ...
Cell 122 (4), 541-552, 2005
2342005
New target for inhibition of bacterial RNA polymerase:‘switch region’
A Srivastava, M Talaue, S Liu, D Degen, RY Ebright, E Sineva, ...
Current opinion in microbiology 14 (5), 532-543, 2011
1972011
Retention of transcription initiation factor σ70 in transcription elongation: single-molecule analysis
AN Kapanidis, E Margeat, TA Laurence, S Doose, SO Ho, ...
Molecular cell 20 (3), 347-356, 2005
1762005
Direct observation of abortive initiation and promoter escape within single immobilized transcription complexes
E Margeat, AN Kapanidis, P Tinnefeld, Y Wang, J Mukhopadhyay, ...
Biophysical journal 90 (4), 1419-1431, 2006
1572006
Systematic structure-activity analysis of microcin J25
O Pavlova, J Mukhopadhyay, E Sineva, RH Ebright, K Severinov
Journal of Biological Chemistry 283 (37), 25589-25595, 2008
1332008
The σ70 subunit of RNA polymerase mediates a promoter-proximal pause at the lac promoter
BE Nickels, J Mukhopadhyay, SJ Garrity, RH Ebright, A Hochschild
Nature structural & molecular biology 11 (6), 544-550, 2004
1032004
Polyphosphate kinase 1, a central node in the stress response network of Mycobacterium tuberculosis, connects the two-component systems MprAB and SenX3 …
S Sanyal, SK Banerjee, R Banerjee, J Mukhopadhyay, M Kundu
Microbiology 159 (Pt_10), 2074-2086, 2013
572013
Fluorescence resonance energy transfer (FRET) in analysis of transcription-complex structure and function
J Mukhopadhyay, V Mekler, E Kortkhonjia, AN Kapanidis, YW Ebright, ...
Methods in enzymology 371, 144-159, 2003
532003
Optimization of recombinant Mycobacterium tuberculosis RNA polymerase expression and purification
R Banerjee, P Rudra, RK Prajapati, S Sengupta, J Mukhopadhyay
Tuberculosis 94 (4), 397-404, 2014
482014
Distance-restrained docking of rifampicin and rifamycin SV to RNA polymerase using systematic FRET measurements: developing benchmarks of model quality and reliability
JL Knight, V Mekler, J Mukhopadhyay, RH Ebright, RM Levy
Biophysical Journal 88 (2), 925-938, 2005
432005
Functional roles of the two cyclic AMP-dependent forms of cyclic AMP receptor protein from Escherichia coli
J Mukhopadhyay, R Sur, P Parrack
FEBS letters 453 (1-2), 215-218, 1999
381999
Mode of action of a designed antimicrobial peptide: high potency against Cryptococcus neoformans
A Datta, V Yadav, A Ghosh, J Choi, D Bhattacharyya, RK Kar, H Ilyas, ...
Biophysical journal 111 (8), 1724-1737, 2016
372016
MtrA, an essential response regulator of the MtrAB two-component system, regulates the transcription of resuscitation-promoting factor B of Mycobacterium tuberculosis
AK Sharma, A Chatterjee, S Gupta, R Banerjee, S Mandal, ...
Microbiology 161 (Pt_6), 1271-1281, 2015
292015
Bacillus subtilis δ factor functions as a transcriptional regulator by facilitating the open complex formation
RK Prajapati, S Sengupta, P Rudra, J Mukhopadhyay
Journal of Biological Chemistry 291 (3), 1064-1075, 2016
222016
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