| RaGOO: fast and accurate reference-guided scaffolding of draft genomes M Alonge, S Soyk, S Ramakrishnan, X Wang, S Goodwin, FJ Sedlazeck, ... Genome biology 20, 1-17, 2019 | 524 | 2019 |
| Major impacts of widespread structural variation on gene expression and crop improvement in tomato M Alonge, X Wang, M Benoit, S Soyk, L Pereira, L Zhang, H Suresh, ... Cell 182 (1), 145-161. e23, 2020 | 509 | 2020 |
| Reciprocal regulation of the TOR kinase and ABA receptor balances plant growth and stress response P Wang, Y Zhao, Z Li, CC Hsu, X Liu, L Fu, YJ Hou, Y Du, S Xie, C Zhang, ... Molecular cell 69 (1), 100-112. e6, 2018 | 424 | 2018 |
| The ABA receptor PYL8 promotes lateral root growth by enhancing MYB77-dependent transcription of auxin-responsive genes Y Zhao, L Xing, X Wang, YJ Hou, J Gao, P Wang, CG Duan, X Zhu, ... Science signaling 7 (328), ra53-ra53, 2014 | 318 | 2014 |
| Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing M Alonge, L Lebeigle, M Kirsche, K Jenike, S Ou, S Aganezov, X Wang, ... Genome biology 23 (1), 258, 2022 | 151 | 2022 |
| The methyl-CpG-binding protein MBD7 facilitates active DNA demethylation to limit DNA hyper-methylation and transcriptional gene silencing Z Lang, M Lei, X Wang, K Tang, D Miki, H Zhang, SK Mangrauthia, W Liu, ... Molecular cell 57 (6), 971-983, 2015 | 129 | 2015 |
| Specific but interdependent functions for Arabidopsis AGO4 and AGO6 in RNA‐directed DNA methylation CG Duan, H Zhang, K Tang, X Zhu, W Qian, YJ Hou, B Wang, Z Lang, ... The EMBO journal 34 (5), 581-592, 2015 | 119 | 2015 |
| A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation CG Duan, X Wang, S Xie, L Pan, D Miki, K Tang, CC Hsu, M Lei, Y Zhong, ... Cell research 27 (2), 226-240, 2017 | 117 | 2017 |
| Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns M Lei, H La, K Lu, P Wang, D Miki, Z Ren, CG Duan, X Wang, K Tang, ... Proceedings of the National Academy of Sciences 111 (1), 527-532, 2014 | 102 | 2014 |
| RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1 X Wang, CG Duan, K Tang, B Wang, H Zhang, M Lei, K Lu, ... Proceedings of the National Academy of Sciences 110 (38), 15467-15472, 2013 | 99 | 2013 |
| Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in Arabidopsis WF Nie, M Lei, M Zhang, K Tang, H Huang, C Zhang, D Miki, P Liu, ... Proceedings of the National Academy of Sciences 116 (33), 16641-16650, 2019 | 86 | 2019 |
| Arabidopsis AGDP1 links H3K9me2 to DNA methylation in heterochromatin C Zhang, X Du, K Tang, Z Yang, L Pan, P Zhu, J Luo, Y Jiang, H Zhang, ... Nature Communications 9 (1), 4547, 2018 | 81 | 2018 |
| Dissecting cis-regulatory control of quantitative trait variation in a plant stem cell circuit X Wang, L Aguirre, D Rodríguez-Leal, A Hendelman, M Benoit, ... Nature Plants 7 (4), 419-427, 2021 | 79 | 2021 |
| Type one protein phosphatase 1 and its regulatory protein inhibitor 2 negatively regulate ABA signaling YJ Hou, Y Zhu, P Wang, Y Zhao, S Xie, G Batelli, B Wang, CG Duan, ... PLoS Genetics 12 (3), e1005835, 2016 | 74 | 2016 |
| MET18 Connects the Cytosolic Iron-Sulfur Cluster Assembly Pathway to Active DNA Demethylation in Arabidopsis CG Duan, X Wang, K Tang, H Zhang, SK Mangrauthia, M Lei, CC Hsu, ... PLoS Genetics 11 (10), e1005559, 2015 | 58 | 2015 |
| A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis CG Duan, X Wang, L Zhang, X Xiong, Z Zhang, K Tang, L Pan, CC Hsu, ... Proceedings of the National Academy of Sciences 114 (35), E7377-E7384, 2017 | 54 | 2017 |
| Critical function of DNA methyltransferase 1 in tomato development and regulation of the DNA methylome and transcriptome Y Yang, K Tang, TU Datsenka, W Liu, S Lv, Z Lang, X Wang, J Gao, ... Journal of Integrative Plant Biology 61 (12), 1224-1242, 2019 | 47 | 2019 |
| HOS1 regulates Argonaute1 by promoting transcription of the microRNA gene MIR168b in Arabidopsis B Wang, CG Duan, X Wang, YJ Hou, J Yan, C Gao, JH Kim, H Zhang, ... The Plant Journal 81 (6), 861-870, 2015 | 33 | 2015 |
| Dynamic evolution of small signalling peptide compensation in plant stem cell control CT Kwon, L Tang, X Wang, I Gentile, A Hendelman, G Robitaille, ... Nature Plants 8 (4), 346-355, 2022 | 23 | 2022 |
| SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis Y Yang, H La, K Tang, D Miki, L Yang, B Wang, CG Duan, W Nie, X Wang, ... Nucleic acids research 45 (1), 181-197, 2017 | 17 | 2017 |
