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Darya Filippova
Darya Filippova
BetterOmics
Verified email at betteromics.com - Homepage
Title
Cited by
Cited by
Year
Sensitive and specific multi-cancer detection and localization using methylation signatures in cell-free DNA
MC Liu, GR Oxnard, EA Klein, C Swanton, MV Seiden, MC Liu, ...
Annals of Oncology 31 (6), 745-759, 2020
7172020
Identification of alternative topological domains in chromatin
D Filippova, R Patro, G Duggal, C Kingsford
Algorithms for Molecular Biology 9, 1-11, 2014
2252014
Development of a comprehensive cell-free DNA (cfDNA) assay for early detection of multiple tumor types: the Circulating Cell-Free Genome Atlas (CCGA) study
Journal of Clinical Oncology 36 (15), 12021, 2018
612018
ICE--visual analytics for transportation incident datasets
ML Pack, K Wongsuphasawat, M VanDaniker, D Filippova
2009 IEEE International Conference on Information Reuse & Integration, 200-205, 2009
462009
Visual analytics for transportation incident data sets
K Wongsuphasawat, ML Pack, D Filippova, M VanDaniker, A Olea
Transportation research record 2138 (1), 135-145, 2009
402009
Prevalence of clonal hematopoiesis of indeterminate potential (CHIP) measured by an ultra-sensitive sequencing assay: Exploratory analysis of the Circulating Cancer Genome …
C Swanton, O Venn, A Aravanis, E Hubbell, T Maddala, JF Beausang, ...
Journal of Clinical Oncology 36 (15_suppl), 12003-12003, 2018
392018
Improving Bloom Filter Performance on Sequence Data Using k-mer Bloom Filters
D Pellow, D Filippova, C Kingsford
Journal of Computational Biology 24 (6), 547-557, 2017
282017
Breast cancer cell-free DNA (cfDNA) profiles reflect underlying tumor biology: The Circulating Cell-Free Genome Atlas (CCGA) study
MC Liu, T Maddala, A Aravanis, E Hubbell, JF Beausang, D Filippova, ...
J Clin Oncol 36 (15_suppl), 536, 2018
272018
Genome-wide sequencing for early stage lung cancer detection from plasma cell-free DNA (cfDNA): the Circulating Cell-free Genome Atlas (CCGA) Study
GR Oxnard
J Clin Oncol 36, 18, 2018
272018
Plasma cell-free DNA (cfDNA) assays for early multi-cancer detection: The circulating cell-free genome atlas (CCGA) study
MC Liu, E Klein, E Hubbell, T Maddala, AM Aravanis, JF Beausang, ...
Annals of Oncology 29, viii14, 2018
262018
Coral: an integrated suite of visualizations for comparing clusterings
D Filippova, A Gadani, C Kingsford
BMC Bioinformatics 13, 276, 2012
172012
Resolving spatial inconsistencies in chromosome conformation measurements
G Duggal, R Patro, E Sefer, H Wang, D Filippova, S Khuller, C Kingsford
Algorithms for Molecular Biology 8, 1-10, 2013
162013
Multiscale Identification of Topological Domains in Chromatin
D Filippova, R Patro, G Duggal, C Kingsford
Proceedings of WABI 2013, 300-312, 2013
152013
The missing models: A data-driven approach for learning how networks grow
R Patro, G Duggal, E Sefer, H Wang, D Filippova, C Kingsford
Proceedings of the 18th ACM SIGKDD international conference on Knowledge …, 2012
122012
Interactive exploration of multivariate categorical data: exploiting ranking criteria to reveal patterns and outliers
D Filippova, B Shneiderman
Human-Computer Interaction Lab, University of Maryland, Technical Report …, 2009
92009
Dynamic exploration of recording sessions between jazz musicians over time
D Filippova, M Fitzgerald, F Benadon, C Kingsford
SocialCom, 2012
72012
Multi-Assay Prediction Model for Cancer Detection
E Hubbell, SS Gross, D Filippova, L Shen, OC Venn, AW Blocker, ...
US Patent App. 16/384,784, 2019
52019
Rapid, Separable Compression Enables Fast Analyses of Sequence Alignments
D Filippova, C Kingsford
BCB, 8, 2015
52015
Method and system for selecting, managing, and analyzing data of high dimensionality
D Filippova, A Valouev, V Nicula, K Jagadeesh, MC MAHER, MH Larson, ...
US Patent App. 16/352,739, 2019
32019
Resolving spatial inconsistencies in chromosome conformation data
G Duggal, R Patro, E Sefer, H Wang, D Filippova, S Khuller, C Kingsford
Workshop on Algorithms in Bioinformatics, 288-300, 2012
32012
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