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Paul Wilmes
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Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
K Atarashi, T Tanoue, K Oshima, W Suda, Y Nagano, H Nishikawa, ...
Nature 500 (7461), 232-236, 2013
23742013
A dietary fiber-deprived gut microbiota degrades the colonic mucus barrier and enhances pathogen susceptibility
MS Desai, AM Seekatz, NM Koropatkin, N Kamada, CA Hickey, M Wolter, ...
Cell 167 (5), 1339-1353. e21, 2016
14762016
Challenges in microbial ecology: building predictive understanding of community function and dynamics
S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf, WT Sloan, OX Cordero, ...
The ISME journal 10 (11), 2557-2568, 2016
5092016
Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota
S Magnúsdóttir, A Heinken, L Kutt, DA Ravcheev, E Bauer, A Noronha, ...
Nature biotechnology 35 (1), 81-89, 2017
4712017
Metaproteomics: studying functional gene expression in microbial ecosystems
P Wilmes, PL Bond
Trends in microbiology 14 (2), 92-97, 2006
3942006
A microfluidics-based in vitro model of the gastrointestinal human–microbe interface
P Shah, JV Fritz, E Glaab, MS Desai, K Greenhalgh, A Frachet, ...
Nature communications 7 (1), 1-15, 2016
3852016
The application of two‐dimensional polyacrylamide gel electrophoresis and downstream analyses to a mixed community of prokaryotic microorganisms
P Wilmes, PL Bond
Environmental Microbiology 6 (9), 911-920, 2004
3842004
Human gut microbiome: function matters
A Heintz-Buschart, P Wilmes
Trends in microbiology 26 (7), 563-574, 2018
3162018
The nasal and gut microbiome in Parkinson's disease and idiopathic rapid eye movement sleep behavior disorder
A Heintz‐Buschart, U Pandey, T Wicke, F Sixel‐Döring, A Janzen, ...
Movement disorders 33 (1), 88-98, 2018
3062018
Global diversity and biogeography of bacterial communities in wastewater treatment plants
L Wu, D Ning, B Zhang, Y Li, P Zhang, X Shan, Q Zhang, MR Brown, Z Li, ...
Nature microbiology 4 (7), 1183-1195, 2019
2802019
Characterization of extracellular polymeric substances from acidophilic microbial biofilms
Y Jiao, GD Cody, AK Harding, P Wilmes, M Schrenk, KE Wheeler, ...
Applied and environmental microbiology 76 (9), 2916-2922, 2010
2472010
Integrated multi-omics of the human gut microbiome in a case study of familial type 1 diabetes
A Heintz-Buschart, P May, CC Laczny, LA Lebrun, C Bellora, A Krishna, ...
Nature microbiology 2 (1), 1-13, 2016
2042016
The complex exogenous RNA spectra in human plasma: an interface with human gut biota?
K Wang, H Li, Y Yuan, A Etheridge, Y Zhou, D Huang, P Wilmes, D Galas
PloS one 7 (12), e51009, 2012
1962012
Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
P Wilmes, AF Andersson, MG Lefsrud, M Wexler, M Shah, B Zhang, ...
The ISME journal 2 (8), 853-864, 2008
1962008
Metaproteomics provides functional insight into activated sludge wastewater treatment
P Wilmes, M Wexler, PL Bond
PLoS One 3 (3), e1778, 2008
1812008
Extensive transmission of microbes along the gastrointestinal tract
TSB Schmidt, MR Hayward, LP Coelho, SS Li, PI Costea, AY Voigt, ...
Elife 8, e42693, 2019
1802019
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
Frontiers in microbiology 8, 738, 2017
1742017
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia
LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun, H Roume, D Lundin, ...
PloS one 9 (4), e95567, 2014
1742014
VizBin-an application for reference-independent visualization and human-augmented binning of metagenomic data
CC Laczny, T Sternal, V Plugaru, P Gawron, A Atashpendar, ...
Microbiome 3 (1), 1-7, 2015
1732015
The human gut microbiome in health: establishment and resilience of microbiota over a lifetime
K Greenhalgh, KM Meyer, KM Aagaard, P Wilmes
Environmental microbiology 18 (7), 2103-2116, 2016
1702016
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