| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium nature 447 (7146), 799, 2007 | 5286 | 2007 |
| NCBI GEO: archive for functional genomics data sets—update T Barrett, SE Wilhite, P Ledoux, C Evangelista, IF Kim, M Tomashevsky, ... Nucleic acids research 41 (D1), D991-D995, 2012 | 4379 | 2012 |
| Orchestrating high-throughput genomic analysis with Bioconductor W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ... Nature methods 12 (2), 115, 2015 | 1979 | 2015 |
| Rare structural variants disrupt multiple genes in neurodevelopmental pathways in schizophrenia T Walsh, JM McClellan, SE McCarthy, AM Addington, SB Pierce, ... Science 320 (5875), 539, 2008 | 1877 | 2008 |
| High-resolution mapping and characterization of open chromatin across the genome AP Boyle, S Davis, HP Shulha, P Meltzer, EH Margulies, Z Weng, ... Cell 132 (2), 311-322, 2008 | 1253 | 2008 |
| BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis S Durinck, Y Moreau, A Kasprzyk, S Davis, B De Moor, A Brazma, ... Bioinformatics 21 (16), 3439-3440, 2005 | 1230 | 2005 |
| GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor S Davis, PS Meltzer Bioinformatics 23 (14), 1846-1847, 2007 | 1016 | 2007 |
| A single IGF1 allele is a major determinant of small size in dogs NB Sutter, CD Bustamante, K Chase, MM Gray, K Zhao, L Zhu, ... Science 316 (5821), 112-115, 2007 | 618 | 2007 |
| Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS) GE Crawford, IE Holt, J Whittle, BD Webb, D Tai, S Davis, EH Margulies, ... Genome research 16 (1), 123-131, 2006 | 516 | 2006 |
| Exome sequencing identifies GRIN2A as frequently mutated in melanoma X Wei, V Walia, JC Lin, JK Teer, TD Prickett, J Gartner, S Davis, ... Nature genetics 43 (5), 442-446, 2011 | 506 | 2011 |
| Gene expression profiling of human sarcomas: insights into sarcoma biology K Baird, S Davis, CR Antonescu, UL Harper, RL Walker, Y Chen, ... Cancer research 65 (20), 9226-9235, 2005 | 356 | 2005 |
| Interaction of the glucocorticoid receptor with the chromatin landscape S John, PJ Sabo, TA Johnson, MH Sung, SC Biddie, SL Lightman, ... Molecular cell 29 (5), 611-624, 2008 | 316 | 2008 |
| Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours X Ma, Y Liu, Y Liu, LB Alexandrov, MN Edmonson, C Gawad, X Zhou, Y Li, ... Nature 555 (7696), 371-376, 2018 | 271 | 2018 |
| DNase-chip: a high-resolution method to identify DNase I hypersensitive sites using tiled microarrays GE Crawford, S Davis, PC Scacheri, G Renaud, MJ Halawi, MR Erdos, ... Nature methods 3 (7), 503-509, 2006 | 266 | 2006 |
| Epigenomic alterations and gene expression profiles in respiratory epithelia exposed to cigarette smoke condensate F Liu, JK Killian, M Yang, RL Walker, JA Hong, M Zhang, S Davis, ... Oncogene 29 (25), 3650-3664, 2010 | 263 | 2010 |
| Super-enhancers delineate disease-associated regulatory nodes in T cells G Vahedi, Y Kanno, Y Furumoto, K Jiang, SCJ Parker, MR Erdos, ... Nature 520 (7548), 558-562, 2015 | 257 | 2015 |
| The exomes of the NCI-60 panel: a genomic resource for cancer biology and systems pharmacology OD Abaan, EC Polley, SR Davis, YJ Zhu, S Bilke, RL Walker, M Pineda, ... Cancer research 73 (14), 4372-4382, 2013 | 255 | 2013 |
| RCircos: an R package for Circos 2D track plots H Zhang, P Meltzer, S Davis BMC bioinformatics 14 (1), 1-5, 2013 | 253 | 2013 |
| Interferon-γ links ultraviolet radiation to melanomagenesis in mice MR Zaidi, S Davis, FP Noonan, C Graff-Cherry, TS Hawley, RL Walker, ... Nature 469 (7331), 548-553, 2011 | 241 | 2011 |
| Canine tumor cross-species genomics uncovers targets linked to osteosarcoma progression M Paoloni, S Davis, S Lana, S Withrow, L Sangiorgi, P Picci, S Hewitt, ... BMC genomics 10 (1), 1-13, 2009 | 214 | 2009 |
Sven BilkeAssociate Director BioinformaticsVerified email at illumina.com
