Genome-scale models of bacterial metabolism: reconstruction and applications M Durot, PY Bourguignon, V Schachter FEMS microbiology reviews 33 (1), 164-190, 2008 | 421 | 2008 |
A complete collection of single‐gene deletion mutants of Acinetobacter baylyi ADP1 V De Berardinis, D Vallenet, V Castelli, M Besnard, A Pinet, C Cruaud, ... Molecular systems biology 4 (1), 174, 2008 | 371 | 2008 |
Rapid and Reliable DNA Assembly via Ligase Cycling Reaction S Kok, LH Stanton, T Slaby, M Durot, VF Holmes, KG Patel, D Platt, ... ACS synthetic biology 3 (2), 97-106, 2014 | 285 | 2014 |
Iterative reconstruction of a global metabolic model of Acinetobacter baylyi ADP1 using high-throughput growth phenotype and gene essentiality data M Durot, F Le Fèvre, V de Berardinis, A Kreimeyer, D Vallenet, C Combe, ... BMC systems biology 2, 1-23, 2008 | 109 | 2008 |
Core and Panmetabolism in Escherichia coli G Vieira, V Sabarly, PY Bourguignon, M Durot, F Le Fevre, D Mornico, ... Journal of bacteriology 193 (6), 1461-1472, 2011 | 76 | 2011 |
Acinetobacter baylyi ADP1 as a model for metabolic system biology V de Berardinis, M Durot, J Weissenbach, M Salanoubat Current opinion in microbiology 12 (5), 568-576, 2009 | 76 | 2009 |
Genome-wide transcriptional responses of two metal-tolerant symbiotic Mesorhizobium isolates to Zinc and Cadmium exposure G Maynaud, B Brunel, D Mornico, M Durot, D Severac, E Dubois, ... BMC genomics 14, 1-24, 2013 | 62 | 2013 |
Low-cost, high-throughput sequencing of DNA assemblies using a highly multiplexed Nextera process EB Shapland, V Holmes, CD Reeves, E Sorokin, M Durot, D Platt, C Allen, ... ACS synthetic biology 4 (7), 860-866, 2015 | 61 | 2015 |
Novel metabolic features in Acinetobacter baylyi ADP1 revealed by a multiomics approach L Stuani, C Lechaplais, AV Salminen, B Ségurens, M Durot, V Castelli, ... Metabolomics 10 (6), 1223-1238, 2014 | 32 | 2014 |
CycSim—an online tool for exploring and experimenting with genome-scale metabolic models F Le Fèvre, S Smidtas, C Combe, M Durot, F d'Alché-Buc, V Schachter Bioinformatics 25 (15), 1987-1988, 2009 | 32 | 2009 |
Small RNA Deep-Sequencing Analyses Reveal a New Regulator of Virulence in Agrobacterium fabrum C58 M Dequivre, B Diel, C Villard, O Sismeiro, M Durot, JY Coppée, X Nesme, ... Molecular Plant-Microbe Interactions 28 (5), 580-589, 2015 | 27 | 2015 |
Strengths and weaknesses of selected modeling methods used in systems biology P Kahlem, A Di Cara, M Durot, J Hancock, E Klipp, V Schchter, E Segal, ... Systems and Computational Biology—Bioinformatics and Computational Modeling, 2011 | 5 | 2011 |
Elucidation du métabolisme des microorganismes par la modélisation et l'interprétation des données d'essentialité de gènes. Application au métabolisme de la bactérie … M Durot Université d'Evry-Val d'Essonne, 2009 | 3 | 2009 |
CycSim-an online genome-scale metabolic model simulator and browser, integrated with pathways databases F Le Fevre, S Smidtas, C Combe, F d'Alché-Buc, V Schächter BMC Bioinformatics 25 (15), 1987--1989, 2009 | 1 | 2009 |
A new genome-scale metabolic model of oleaginous microalgae with refined lipid metabolism elucidates Microchloropsis gaditana mutant phenotypes C Dupont-Thibert, S Roy, S Carneiro, B Pereira, R Carreira, P Vilaça, ... bioRxiv, 2023.12. 06.570374, 2023 | | 2023 |
BMC systems biology Volume: 2 ISSN: 1752-0509 ISO Abbreviation: BMC Syst Biol Publication Date: 2008 M Durot, F Le Fèvre, V de Berardinis, A Kreimeyer, D Vallenet, C Combe, ... Detail:, 0 | | |
Analyzing RNA-Seq Data within the MicroScope Web-based Platform B CHANE-WOON-MING, M WEIMAN, D VALLENET, V de BERARDINIS, ... | | |
Metabolic Flux Analysis M Durot, ENS Groupe de Travail | | |
Constraint-Based Modeling of Metabolism M Durot | | |
A tutorial on Metabolic Flux Analysis M Durot, V Schachter | | |