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Mingxun Wang
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Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
140712019
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ...
Nature biotechnology 34 (8), 828-837, 2016
32252016
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition
EW Deutsch, A Csordas, Z Sun, A Jarnuczak, Y Perez-Riverol, T Ternent, ...
Nucleic acids research, gkw936, 2016
8542016
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature methods 17 (9), 905-908, 2020
7982020
Qiita: rapid, web-enabled microbiome meta-analysis
A Gonzalez, JA Navas-Molina, T Kosciolek, D McDonald, ...
Nature methods 15 (10), 796-798, 2018
5242018
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
AT Aron, EC Gentry, KL McPhail, LF Nothias, M Nothias-Esposito, ...
Nature protocols 15 (6), 1954-1991, 2020
4062020
Molecular cartography of the human skin surface in 3D
A Bouslimani, C Porto, CM Rath, M Wang, Y Guo, A Gonzalez, ...
Proceedings of the National Academy of Sciences 112 (17), E2120-E2129, 2015
3872015
Global chemical effects of the microbiome include new bile-acid conjugations
RA Quinn, AV Melnik, A Vrbanac, T Fu, KA Patras, MP Christy, Z Bodai, ...
Nature 579 (7797), 123-129, 2020
3702020
MolNetEnhancer: Enhanced molecular networks by integrating metabolome mining and annotation tools
M Ernst, KB Kang, AM Caraballo-Rodríguez, LF Nothias, J Wandy, ...
Metabolites 9 (7), 144, 2019
310*2019
The natural products atlas: an open access knowledge base for microbial natural products discovery
JA Van Santen, G Jacob, AL Singh, V Aniebok, MJ Balunas, D Bunsko, ...
ACS central science 5 (11), 1824-1833, 2019
3072019
Bioactivity-based molecular networking for the discovery of drug leads in natural product bioassay-guided fractionation
LF Nothias, M Nothias-Esposito, R Da Silva, M Wang, I Protsyuk, Z Zhang, ...
Journal of natural products 81 (4), 758-767, 2018
3012018
Propagating annotations of molecular networks using in silico fragmentation
RR da Silva, M Wang, LF Nothias, JJJ van der Hooft, ...
PLoS computational biology 14 (4), e1006089, 2018
2902018
Learning representations of microbe–metabolite interactions
JT Morton, AA Aksenov, LF Nothias, JR Foulds, RA Quinn, MH Badri, ...
Nature methods 16 (12), 1306-1314, 2019
2342019
Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species
KR Duncan, M Crüsemann, A Lechner, A Sarkar, J Li, N Ziemert, M Wang, ...
Chemistry & biology 22 (4), 460-471, 2015
2012015
Mass spectrometry searches using MASST
M Wang, AK Jarmusch, F Vargas, AA Aksenov, JM Gauglitz, K Weldon, ...
Nature biotechnology 38 (1), 23-26, 2020
1942020
Significance estimation for large scale metabolomics annotations by spectral matching
K Scheubert, F Hufsky, D Petras, M Wang, LF Nothias, K Dührkop, ...
Nature Communications 8 (1), 1494, 2017
1792017
Discovering and linking public omics data sets using the Omics Discovery Index
Y Perez-Riverol, M Bai, F da Veiga Leprevost, S Squizzato, YM Park, ...
Nature biotechnology 35 (5), 406-409, 2017
1712017
Integrative analysis of multimodal mass spectrometry data in MZmine 3
R Schmid, S Heuckeroth, A Korf, A Smirnov, O Myers, TS Dyrlund, ...
Nature biotechnology 41 (4), 447-449, 2023
1692023
NPClassifier: a deep neural network-based structural classification tool for natural products
HW Kim, M Wang, CA Leber, LF Nothias, R Reher, KB Kang, ...
Journal of Natural Products 84 (11), 2795-2807, 2021
1602021
Assembling the community-scale discoverable human proteome
M Wang, J Wang, J Carver, BS Pullman, SW Cha, N Bandeira
Cell systems 7 (4), 412-421. e5, 2018
1582018
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Artikelen 1–20