Helen Causton
Helen Causton
Verified email at cumc.columbia.edu
Cited by
Cited by
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ...
Nature genetics 29 (4), 365-371, 2001
Remodeling of yeast genome expression in response to environmental changes
HC Causton, B Ren, SS Koh, CT Harbison, E Kanin, EG Jennings, TI Lee, ...
Molecular biology of the cell 12 (2), 323-337, 2001
Integrated transcriptional profiling and linkage analysis for identification of genes underlying disease
N Hubner, CA Wallace, H Zimdahl, E Petretto, H Schulz, F Maciver, ...
Nature genetics 37 (3), 243-253, 2005
An integrated approach to uncover drivers of cancer
UD Akavia, O Litvin, J Kim, F Sanchez-Garcia, D Kotliar, HC Causton, ...
Cell 143 (6), 1005-1017, 2010
Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast
JJ Wyrick, FCP Holstege, EG Jennings, HC Causton, D Shore, ...
Nature 402 (6760), 418-421, 1999
Redundant roles for the TFIID and SAGA complexes in global transcription
TI Lee, HC Causton, FCP Holstege, WC Shen, N Hannett, EG Jennings, ...
Nature 405 (6787), 701-704, 2000
ArrayExpress update—trends in database growth and links to data analysis tools
G Rustici, N Kolesnikov, M Brandizi, T Burdett, M Dylag, I Emam, A Farne, ...
Nucleic acids research 41 (D1), D987-D990, 2012
The external RNA controls consortium: a progress report
SC Baker, SR Bauer, RP Beyer, JD Brenton, B Bromley, J Burrill, ...
Nature methods 2 (10), 731, 2005
Control of messenger RNA stability
JG Belasco, G Brawerman
Elsevier, 2012
A protein complex mediating mRNA degradation in Escherichia coli
B Py, H Causton, EA Mudd, CF Higgins
Molecular microbiology 14 (4), 717-729, 1994
The MGED Ontology: a resource for semantics-based description of microarray experiments
PL Whetzel, H Parkinson, HC Causton, L Fan, J Fostel, G Fragoso, ...
Bioinformatics 22 (7), 866-873, 2006
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
TF Rayner, P Rocca-Serra, PT Spellman, HC Causton, A Farne, ...
BMC bioinformatics 7 (1), 489, 2006
Microarray databases: standards and ontologies
CJ Stoeckert, HC Causton, CA Ball
nature genetics 32 (4), 469-473, 2002
Microarray gene expression data analysis: a beginner's guide
H Causton, J Quackenbush, A Brazma
John Wiley & Sons, 2009
The yeast A kinases differentially regulate iron uptake and respiratory function
LS Robertson, HC Causton, RA Young, GR Fink
Proceedings of the National Academy of Sciences 97 (11), 5984-5988, 2000
Standards for microarray data
CA Ball, G Sherlock, H Parkinson, P Rocca-Sera, C Brooksbank, ...
Science 298 (5593), 539b-539b, 2002
mRNA degradation by processive 3′-5′ exoribonucleases in vitro and the implications for prokaryotic mRNA decay in vivo
RS McLaren, SF Newbury, GSC Dance, HC Causton, CF Higgins
Journal of molecular biology 221 (1), 81-95, 1991
Submission of microarray data to public repositories
CA Ball, A Brazma, H Causton, S Chervitz, R Edgar, P Hingamp, ...
PLoS Biol 2 (9), e317, 2004
Systematic analysis of essential yeast TAFs in genome‐wide transcription and preinitiation complex assembly
WC Shen, SR Bhaumik, HC Causton, I Simon, X Zhu, EG Jennings, ...
The EMBO Journal 22 (13), 3395-3402, 2003
Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)
EW Deutsch, CA Ball, JJ Berman, GS Bova, A Brazma, RE Bumgarner, ...
Nature biotechnology 26 (3), 305-312, 2008
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