| Pathway-specific differences between tumor cell lines and normal and tumor tissue cells A Ertel, A Verghese, SW Byers, M Ochs, A Tozeren Molecular cancer 5 (1), 1-13, 2006 | 279 | 2006 |
| Activation of the NOTCH Pathway in Head and Neck CancerNOTCH in Head and Neck Cancer W Sun, DA Gaykalova, MF Ochs, E Mambo, D Arnaoutakis, Y Liu, M Loyo, ... Cancer research 74 (4), 1091-1104, 2014 | 270 | 2014 |
| Serum microRNA biomarkers for detection of non-small cell lung cancer PT Hennessey, T Sanford, A Choudhary, WW Mydlarz, D Brown, AT Adai, ... PloS one 7 (2), e32307, 2012 | 245 | 2012 |
| Enter the matrix: factorization uncovers knowledge from omics GL Stein-O’Brien, R Arora, AC Culhane, AV Favorov, LX Garmire, ... Trends in Genetics 34 (10), 790-805, 2018 | 215 | 2018 |
| A Markov chain Monte Carlo technique for identification of combinations of allelic variants underlying complex diseases in humans AV Favorov, TV Andreewski, MA Sudomoina, OO Favorova, G Parmigiani, ... Genetics 171 (4), 2113-2121, 2005 | 207 | 2005 |
| Comparison of simian immunodeficiency virus isolates HW Kestler III, Y Li, YM Naidu, CV Butler, MF Ochs, G Jaenel, NW King, ... Nature 331 (6157), 619-621, 1988 | 203 | 1988 |
| Response markers and the molecular mechanisms of action of Gleevec in gastrointestinal stromal tumors A Frolov, S Chahwan, M Ochs, JP Arnoletti, ZZ Pan, O Favorova, ... Molecular cancer therapeutics 2 (8), 699-709, 2003 | 184 | 2003 |
| A resource for analysis of microRNA expression and function in pancreatic ductal adenocarcinoma cells OA Kent, ME Mullendore, EA Wentzel, P López-Romero, AC Tan, ... Cancer biology & therapy 8 (21), 2013-2024, 2009 | 146 | 2009 |
| LS-NMF: a modified non-negative matrix factorization algorithm utilizing uncertainty estimates G Wang, AV Kossenkov, MF Ochs BMC bioinformatics 7 (1), 1-10, 2006 | 142 | 2006 |
| Coordinated activation of candidate proto-oncogenes and cancer testes antigens via promoter demethylation in head and neck cancer and lung cancer IM Smith, CA Glazer, SK Mithani, MF Ochs, W Sun, S Bhan, A Vostrov, ... PloS one 4 (3), e4961, 2009 | 124 | 2009 |
| A new method for spectral decomposition using a bilinear Bayesian approach MF Ochs, RS Stoyanova, F Arias-Mendoza, TR Brown Journal of Magnetic Resonance 137 (1), 161-176, 1999 | 114 | 1999 |
| Application of Bayesian decomposition for analysing microarray data TD Moloshok, RR Klevecz, JD Grant, FJ Manion, WF Speier IV, MF Ochs Bioinformatics 18 (4), 566-575, 2002 | 111 | 2002 |
| t4 workshop report: pathways of toxicity A Kleensang, A Maertens, M Rosenberg, S Fitzpatrick, J Lamb, ... Altex 31 (1), 53, 2014 | 108 | 2014 |
| Telometric: A Tool Providing Simplified, Reproducible Measurements of Telomeric DNA from Constant Field Agarose Gels JD Grant, D Broccoli, M Muquit, FJ Manion, J Tisdall, MF Ochs Biotechniques 31 (6), 1314-1318, 2001 | 103 | 2001 |
| Novel insight into mutational landscape of head and neck squamous cell carcinoma DA Gaykalova, E Mambo, A Choudhary, J Houghton, K Buddavarapu, ... PloS one 9 (3), e93102, 2014 | 101 | 2014 |
| CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data EJ Fertig, J Ding, AV Favorov, G Parmigiani, MF Ochs Bioinformatics 26 (21), 2792-2793, 2010 | 92 | 2010 |
| Integrative discovery of epigenetically derepressed cancer testis antigens in NSCLC CA Glazer, IM Smith, MF Ochs, S Begum, W Westra, SS Chang, W Sun, ... PloS one 4 (12), e8189, 2009 | 87 | 2009 |
| Promoter methylation in head and neck squamous cell carcinoma cell lines is significantly different than methylation in primary tumors and xenografts PT Hennessey, MF Ochs, WW Mydlarz, W Hsueh, L Cope, W Yu, ... PloS one 6 (5), e20584, 2011 | 80 | 2011 |
| MAGEB2 is Activated by Promoter Demethylation in Head and Neck Squamous Cell Carcinoma KM Pattani, E Soudry, CA Glazer, MF Ochs, H Wang, J Schussel, W Sun, ... Public Library of Science 7 (9), e45534, 2012 | 78 | 2012 |
| Global reactivation of epigenetically silenced genes in prostate cancer I Ibragimova, I Ibáñez de Cáceres, AM Hoffman, A Potapova, E Dulaimi, ... Cancer prevention research 3 (9), 1084-1092, 2010 | 77 | 2010 |
