Gene co-expression analysis for functional classification and gene–disease predictions S Van Dam, U Vosa, A van der Graaf, L Franke, JP de Magalhaes Briefings in bioinformatics 19 (4), 575-592, 2018 | 980 | 2018 |
Insights into the evolution of longevity from the bowhead whale genome M Keane, J Semeiks, AE Webb, YI Li, V Quesada, T Craig, LB Madsen, ... Cell reports 10 (1), 112-122, 2015 | 348 | 2015 |
GeneFriends: a human RNA-seq-based gene and transcript co-expression database S van Dam, T Craig, JP de Magalhães Nucleic acids research 43 (D1), D1124-D1132, 2015 | 130 | 2015 |
A comparison of human and mouse gene co-expression networks reveals conservation and divergence at the tissue, pathway and disease levels G Monaco, S van Dam, JL Casal Novo Ribeiro, A Larbi, JP de Magalhães BMC evolutionary biology 15, 1-14, 2015 | 125 | 2015 |
Improving the diagnostic yield of exome-sequencing by predicting gene–phenotype associations using large-scale gene expression analysis P Deelen, S van Dam, JC Herkert, JM Karjalainen, H Brugge, KM Abbott, ... Nature communications 10 (1), 2837, 2019 | 121 | 2019 |
Brain expression quantitative trait locus and network analyses reveal downstream effects and putative drivers for brain-related diseases N de Klein, EA Tsai, M Vochteloo, D Baird, Y Huang, CY Chen, ... Nature genetics 55 (3), 377-388, 2023 | 99 | 2023 |
A meta-analysis of caloric restriction gene expression profiles to infer common signatures and regulatory mechanisms M Plank, D Wuttke, S van Dam, SA Clarke, JP de Magalhaes Molecular BioSystems 8 (4), 1339-1349, 2012 | 94 | 2012 |
GeneFriends: an online co-expression analysis tool to identify novel gene targets for aging and complex diseases S van Dam, R Cordeiro, T Craig, J van Dam, SH Wood, JP de Magalhães BMC genomics 13, 1-14, 2012 | 83 | 2012 |
Transcriptome analysis in calorie-restricted rats implicates epigenetic and post-translational mechanisms in neuroprotection and aging SH Wood, S van Dam, T Craig, R Tacutu, A O’Toole, BJ Merry, ... Genome biology 16, 1-18, 2015 | 61 | 2015 |
Overlapping SETBP1 gain-of-function mutations in Schinzel-Giedion syndrome and hematologic malignancies R Acuna-Hidalgo, P Deriziotis, M Steehouwer, C Gilissen, SA Graham, ... PLoS genetics 13 (3), e1006683, 2017 | 46 | 2017 |
Gathering insights on disease etiology from gene expression profiles of healthy tissues AS Silva, SH Wood, S van Dam, S Berres, A McArdle, JP de Magalhães Bioinformatics 27 (23), 3300-3305, 2011 | 24 | 2011 |
Evolution, structure and emerging roles of C1ORF112 in DNA replication, DNA damage responses, and cancer J Edogbanya, D Tejada‐Martinez, NJ Jones, A Jaiswal, S Bell, R Cordeiro, ... Cellular and Molecular Life Sciences 78, 4365-4376, 2021 | 15 | 2021 |
A pilot study on the prevalence of micronutrient imbalances in a Dutch general population cohort and the effects of a digital lifestyle program J Castela Forte, R Gannamani, P Folkertsma, S Kanthappu, S van Dam, ... Nutrients 14 (7), 1426, 2022 | 5 | 2022 |
Development and validation of decision rules models to stratify coronary artery disease, diabetes, and hypertension risk in preventive care: cohort study of returning UK … J Castela Forte, P Folkertsma, R Gannamani, S Kumaraswamy, S Mount, ... Journal of personalized medicine 11 (12), 1322, 2021 | 5 | 2021 |
Changes in blood lipid levels after a digitally enabled cardiometabolic preventive health program: pre-post study in an adult Dutch general population cohort J Castela Forte, R Gannamani, P Folkertsma, S Kumaraswamy, S Mount, ... JMIR cardio 6 (1), e34946, 2022 | 4 | 2022 |
The necessity of incorporating non-genetic risk factors into polygenic risk score models S van Dam, P Folkertsma, J Castela Forte, DH de Vries, ... Scientific Reports 13 (1), 1351, 2023 | 2 | 2023 |
Effect of a digitally-enabled, preventive health program on blood pressure in an adult, Dutch general population cohort: an observational pilot study J Castela Forte, P Folkertsma, R Gannamani, S Kumaraswamy, ... International Journal of Environmental Research and Public Health 19 (7), 4171, 2022 | 2 | 2022 |
Effective questionnaire-based prediction models for type 2 diabetes across several ethnicities: a model development and validation study M Kokkorakis, P Folkertsma, S van Dam, N Sirotin, S Taheri, O Chagoury, ... EClinicalMedicine 64, 2023 | 1 | 2023 |
Development and exploitation of GeneFriends: An online database for gene and transcript co-expression analysis S van Dam PQDT-Global, 2017 | 1 | 2017 |
A Digitally Enabled Combined Lifestyle Intervention for Weight Loss: Pilot Study in a Dutch General Population Cohort R Gannamani, J Castela Forte, P Folkertsma, S Hermans, ... JMIR Formative Research 8, e38891, 2024 | | 2024 |