| Iron starvation triggers the stringent response and induces amino acid biosynthesis for bacillibactin production in Bacillus subtilis M Miethke, H Westers, EJ Blom, OP Kuipers, MA Marahiel Journal of bacteriology 188 (24), 8655-8657, 2006 | 52 | 2006 |
| Time-resolved transcriptomics and bioinformatic analyses reveal intrinsic stress responses during batch culture of Bacillus subtilis EJ Blom, ANJA Ridder, AT Lulko, JBTM Roerdink, OP Kuipers PLoS One 6 (11), e27160, 2011 | 44 | 2011 |
| Production and secretion stress caused by overexpression of heterologous α-amylase leads to inhibition of sporulation and a prolonged motile phase in Bacillus subtilis AT Lulko, JW Veening, G Buist, WK Smits, EJ Blom, AC Beekman, S Bron, ... Applied and environmental microbiology 73 (16), 5354-5362, 2007 | 44 | 2007 |
| FIVA: Functional Information Viewer and Analyzer extracting biological knowledge from transcriptome data of prokaryotes EJ Blom, DWJ Bosman, SAFT van Hijum, R Breitling, L Tijsma, R Silvis, ... Bioinformatics 23 (9), 1161-1163, 2007 | 41 | 2007 |
| DISCLOSE: DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcription factor binding sites EJ Blom, SAFT van Hijum, KJ Hofstede, R Silvis, JBTM Roerdink, ... BMC bioinformatics 9 (1), 1-11, 2008 | 14 | 2008 |
| Prosecutor: parameter-free inference of gene function for prokaryotes using DNA microarray data, genomic context and multiple gene annotation sources EJ Blom, R Breitling, KJ Hofstede, JBTM Roerdink, SAFT van Hijum, ... BMC genomics 9 (1), 1-12, 2008 | 11 | 2008 |
| MOTIFATOR: detection and characterization of regulatory motifs using prokaryote transcriptome data EJ Blom, JBTM Roerdink, OP Kuipers, SAFT van Hijum Bioinformatics 25 (4), 550-551, 2009 | 9 | 2009 |
| Culture of Bacillus subtilis SH Bok, SU Kim, KH Son, SK Kim, YK Kim, HW Lee, JW Lee, HK Kwon, ... US Patent 5,155,041, 1992 | 7 | 1992 |
| Move: A multi-level ontology-based visualization and exploration framework for genomic networks DWJ Bosman, EJ Blom, PJ Ogao, OP Kuipers, JBTM Roerdink In silico biology 7 (1), 35-59, 2007 | 6 | 2007 |
| MOVE: A multi-level ontology-based visualization and exploration framework for genomic networks DWJ Bosman, EJ Blom, PJ Ogao, OP Kuipers, J Roerdink Silico Biology 7 (0004), 2006 | 3 | 2006 |
| Culture of Bacillus subtilis EJ Blom, ANJA Ridder, AT Lulko, JBTM Roerdink, OP Kuipers | 1 | 2011 |
| Computational genomics for prokaryotes: novel applications EJ Blom [Sn], 2009 | | 2009 |
| A bioinformatics framework for modeling, visualization and simulation of gene regulatory networks EJ Blom, DWJ Bosman, P Ogao, OP Kuipers, J BTM | | |
