Ramneek Gupta

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Søren BrunakProfessor of Disease Systems Biology, University of CopenhagenVerified email at cpr.ku.dk
Thomas Sicheritz-PontenProfessor in Computational Phage Biodiscovery, University of CopenhagenVerified email at sund.ku.dk
Rachita YadavInstructor, MGH & Harvard medical school, Broad InstituteVerified email at mgh.harvard.edu
Agata Wesolowska-AndersenUniversity of OxfordVerified email at well.ox.ac.uk
Lars Juhl JensenUniversity of CopenhagenVerified email at cpr.ku.dk
Tine Rask LichtProfessor, Technical University of DenmarkVerified email at food.dtu.dk
Nikolaj Sorgenfrei BlomSenior Researcher, DTUVerified email at dtu.dk
Karen SkriverProfessor University of CopenhagenVerified email at bio.ku.dk
Oluf PedersenProfessor of Metabolic Genetics, University of CopenhagenVerified email at sund.ku.dk
Torben HansenProfessor of Metabolic Genetics, University of Copenhagen, DenmarkVerified email at sund.ku.dk
Henrik Bjørn NielsenChief Scientific Officer, Clinical-Microbiomics A/SVerified email at clinical-microbiomics.com
Hiren J JoshiCopenhagen Center for Glycomics, University of CopenhagenVerified email at sund.ku.dk
Christopher T. WorkmanTechnical University of Denmark, Department of Biotechnology and BiomedicineVerified email at dtu.dk
Jakob LauritsenRigshospitalet, CopenhagenVerified email at regionh.dk
Lotte LauritzenDepartment of Nutrition, Exercise and Sports, University of CopenhagenVerified email at nexs.ku.dk
Kirstine G. BellingAssociate Professor, Novo Nordisk Foundation Center for Protein Research, University of CopenhagenVerified email at cpr.ku.dk
Henrik DitzelProfessor, consultant, Head of ResearchVerified email at health.sdu.dk
Henrik LeffersSenior Scientist, University of Copenhagen, Denmark. henrik@leffers.proVerified email at leffers.pro
Anders KroghDepartment of Computer Science and Center for Health Data Science, University of CopenhagenVerified email at di.ku.dk
Daniel EdsgärdPostDoc Bioinformatics, Karolinska Institutet, StockholmVerified email at ki.se

Ramneek Gupta

Technical University of Denmark

Verified email at cbs.dtu.dk

Bioinformatics Glycobiology Protein Function Translational medicine


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Prediction of post‐translational glycosylation and phosphorylation of proteins from the amino acid sequence N Blom, T Sicheritz‐Pontén, R Gupta, S Gammeltoft, S Brunak Proteomics 4 (6), 1633-1649, 2004	2345	2004
Prediction of glycosylation across the human proteome and the correlation to protein function R Gupta, S Brunak Biocomputing 2002, 310-322, 2001	1528*	2001
Precision mapping of the human O‐GalNAc glycoproteome through SimpleCell technology C Steentoft, SY Vakhrushev, HJ Joshi, Y Kong, MB Vester‐Christensen, ... The EMBO journal 32 (10), 1478-1488, 2013	1385	2013
Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites K Julenius, A Mølgaard, R Gupta, S Brunak Glycobiology 15 (2), 153-164, 2005	1100	2005
Ancient human genome sequence of an extinct Palaeo-Eskimo M Rasmussen, Y Li, S Lindgreen, JS Pedersen, A Albrechtsen, I Moltke, ... Nature 463 (7282), 757-762, 2010	986	2010
Analysis and prediction of leucine-rich nuclear export signals T La Cour, L Kiemer, A Mølgaard, R Gupta, K Skriver, S Brunak Protein Engineering Design and Selection 17 (6), 527-536, 2004	983	2004
An Aboriginal Australian genome reveals separate human dispersals into Asia M Rasmussen, X Guo, Y Wang, KE Lohmueller, S Rasmussen, ... Science 334 (6052), 94-98, 2011	865	2011
A genome-wide association study identifies CDHR3 as a susceptibility locus for early childhood asthma with severe exacerbations K Bønnelykke, P Sleiman, K Nielsen, E Kreiner-Møller, JM Mercader, ... Nature genetics 46 (1), 51-55, 2014	644	2014
The genome of a Late Pleistocene human from a Clovis burial site in western Montana M Rasmussen, SL Anzick, MR Waters, P Skoglund, M DeGiorgio, ... Nature 506 (7487), 225-229, 2014	590	2014
Prediction of human protein function from post-translational modifications and localization features LJ Jensen, R Gupta, N Blom, D Devos, J Tamames, C Kesmir, H Nielsen, ... Journal of molecular biology 319 (5), 1257-1265, 2002	464	2002
Whole grain-rich diet reduces body weight and systemic low-grade inflammation without inducing major changes of the gut microbiome: a randomised cross-over trial JK Vogt, M Kristensen, LBS Hansen, S Ibrügger, RB Mærkedahl, MI Bahl, ... Gut 68 (1), 83-93, 2019	390	2019
Prediction of human protein function according to Gene Ontology categories LJ Jensen, R Gupta, HH Staerfeldt, S Brunak Bioinformatics 19 (5), 635-642, 2003	374	2003
Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut HM Roager, L Hansen, MI Bahl, HL Frandsen, V Carvalho, RJ Gøbel, ... Nature microbiology 1 (9), 1-9, 2016	343	2016
Meta-analysis of genome-wide association studies identifies ten loci influencing allergic sensitization K Bønnelykke, MC Matheson, TH Pers, R Granell, DP Strachan, AC Alves, ... Nature genetics 45 (8), 902-906, 2013	291	2013
NESbase version 1.0: a database of nuclear export signals T la Cour, R Gupta, K Rapacki, K Skriver, FM Poulsen, S Brunak Nucleic acids research 31 (1), 393-396, 2003	278	2003
NESbase version 1.0: a database of nuclear export signals T la Cour, R Gupta, K Rapacki, K Skriver, FM Poulsen, S Brunak Nucleic acids research 31 (1), 393-396, 2003	278	2003
Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysis A Wesolowska-Andersen, MI Bahl, V Carvalho, K Kristiansen, ... Microbiome 2, 1-11, 2014	276	2014
O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins R Gupta, H Birch, K Rapacki, S Brunak, JE Hansen Nucleic acids research 27 (1), 370-372, 1999	224	1999
Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios S Besenbacher, S Liu, JMG Izarzugaza, J Grove, K Belling, J Bork-Jensen, ... Nature communications 6 (1), 5969, 2015	185	2015
Sequencing and de novo assembly of 150 genomes from Denmark as a population reference L Maretty, JM Jensen, B Petersen, JA Sibbesen, S Liu, P Villesen, L Skov, ... Nature 548 (7665), 87-91, 2017	159	2017

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