Charles Ofria

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Richard LenskiMicrobiology Evolution Ecology BEACON, Michigan State UniversityVerified email at msu.edu
Christoph AdamiProfessor of Microbiology & Molecular Genetics, Physics & Astronomy, Michigan State UniversityVerified email at msu.edu
Jeff CluneAssociate Professor of Computer Science, U. British Columbia; Research Manager, OpenAIVerified email at ubc.ca
Philip K. McKinleyMichigan State UniversityVerified email at cse.msu.edu
Claus WilkeProfessor, Department of Integrative Biology, The University of Texas at AustinVerified email at austin.utexas.edu
Heather GoldsbyNSF Postdoctoral Fellow, University of WashingtonVerified email at uw.edu
Emily DolsonMichigan State UniversityVerified email at msu.edu
Benjamin BeckmannManaging Partner, Genesis Professional GroupVerified email at genesisprofessionalgroup.com
David B. KnoesterAmazon.comVerified email at amazon.com
Travis C CollierVector Genetics Lab, University of California DavisVerified email at ucdavis.edu
Luis ZamanAssistant Professor in EEB and Complex SystemsVerified email at umich.edu
Santiago F. ElenaProfessor, CSICVerified email at uv.es
Andreas WagnerUniversity of ZurichVerified email at ieu.uzh.ch
Michael WiserBEACON, Michigan State UniversityVerified email at msu.edu
Alexander LalejiniMichigan State University, Center for the Study of Evolution in Action (BEACON)Verified email at msu.edu
Anya E VostinarCarleton CollegeVerified email at carleton.edu
Michael WhitlockProfessor of Zoology, University of British ColumbiaVerified email at zoology.ubc.ca
Walter FontanaProfessor of Systems Biology, Harvard Medical SchoolVerified email at hms.harvard.edu
Lin ChaoProfessor of Ecology, Behavior and Evolution, UCSDVerified email at ucsd.edu
Thomas F. HansenUniversity of OsloVerified email at bio.uio.no

Charles Ofria

Michigan State University

Verified email at cse.msu.edu - Homepage

Artificial Life Digital Evolution Evolutionary Computation Bio-Inspired Computing Evolutionary Biology


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The evolutionary origin of complex features RE Lenski, C Ofria, RT Pennock, C Adami Nature 423 (6936), 139-144, 2003	776	2003
Perspective: evolution and detection of genetic robustness JAGM de Visser, J Hermisson, GP Wagner, LA Meyers, ... Evolution 57 (9), 1959-1972, 2003	701	2003
Evolution of digital organisms at high mutation rates leads to survival of the flattest CO Wilke, JL Wang, C Ofria, RE Lenski, C Adami Nature 412 (6844), 331-333, 2001	670	2001
Evolution of biological complexity C Adami, C Ofria, TC Collier Proceedings of the National Academy of Sciences 97 (9), 4463-4468, 2000	657	2000
Avida: A software platform for research in computational evolutionary biology C Ofria, CO Wilke Artificial life 10 (2), 191-229, 2004	433	2004
Genome complexity, robustness and genetic interactions in digital organisms RE Lenski, C Ofria, TC Collier, C Adami Nature 400 (6745), 661-664, 1999	386	1999
Balancing robustness and evolvability RE Lenski, JE Barrick, C Ofria PLoS Biol 4 (12), e428, 2006	230	2006
Evolving coordinated quadruped gaits with the HyperNEAT generative encoding J Clune, BE Beckmann, C Ofria, RT Pennock 2009 iEEE congress on evolutionary computation, 2764-2771, 2009	202	2009
Adaptive radiation from resource competition in digital organisms SS Chow, CO Wilke, C Ofria, RE Lenski, C Adami Science 305 (5680), 84-86, 2004	162	2004
On the performance of indirect encoding across the continuum of regularity J Clune, KO Stanley, RT Pennock, C Ofria IEEE Transactions on Evolutionary Computation 15 (3), 346-367, 2011	145	2011
The surprising creativity of digital evolution: A collection of anecdotes from the evolutionary computation and artificial life research communities J Lehman, J Clune, D Misevic, C Adami, L Altenberg, J Beaulieu, ... Artificial life 26 (2), 274-306, 2020	137	2020
Sexual reproduction reshapes the genetic architecture of digital organisms D Misevic, C Ofria, RE Lenski Proceedings of the Royal Society B: Biological Sciences 273 (1585), 457-464, 2006	135	2006
Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes J Clune, D Misevic, C Ofria, RE Lenski, SF Elena, R Sanjuán PLoS Comput Biol 4 (9), e1000187, 2008	114	2008
Distributed cooperative caching in social wireless networks M Taghizadeh, K Micinski, S Biswas, C Ofria, E Torng IEEE Transactions on Mobile Computing 12 (6), 1037-1053, 2012	112	2012
Task-switching costs promote the evolution of division of labor and shifts in individuality HJ Goldsby, A Dornhaus, B Kerr, C Ofria Proceedings of the National Academy of Sciences 109 (34), 13686-13691, 2012	97	2012
Open-ended evolution: Perspectives from the OEE workshop in York T Taylor, M Bedau, A Channon, D Ackley, W Banzhaf, G Beslon, E Dolson, ... Artificial life 22 (3), 408-423, 2016	93	2016
Coevolution drives the emergence of complex traits and promotes evolvability L Zaman, JR Meyer, S Devangam, DM Bryson, RE Lenski, C Ofria PLoS Biol 12 (12), e1002023, 2014	83	2014
Experiments on the role of deleterious mutations as stepping stones in adaptive evolution AW Covert, RE Lenski, CO Wilke, C Ofria Proceedings of the National Academy of Sciences 110 (34), E3171-E3178, 2013	81	2013
Effects of population size and mutation rate on the evolution of mutational robustness SF Elena, CO Wilke, C Ofria, RE Lenski Evolution 61 (3), 666-674, 2007	72	2007
Evolving digital ecological networks MA Fortuna, L Zaman, AP Wagner, C Ofria PLoS Comput Biol 9 (3), e1002928, 2013	70	2013

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