Charles Ofria

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Richard LenskiMicrobiology Evolution Ecology BEACON, Michigan State UniversityVerified email at msu.edu
Christoph AdamiProfessor of Microbiology & Molecular Genetics, Physics & Astronomy, Michigan State UniversityVerified email at msu.edu
Jeff CluneAssociate Professor of Computer Science, U. British Columbia; Faculty Member, Vector InstituteVerified email at ubc.ca
Emily DolsonMichigan State UniversityVerified email at msu.edu
Heather GoldsbyNSF Postdoctoral Fellow, University of WashingtonVerified email at uw.edu
Philip K. McKinleyMichigan State UniversityVerified email at cse.msu.edu
Claus WilkeProfessor, Department of Integrative Biology, The University of Texas at AustinVerified email at austin.utexas.edu
Alexander LalejiniUniversity of MichiganVerified email at umich.edu
Benjamin BeckmannManaging Partner, Genesis Professional GroupVerified email at genesisprofessionalgroup.com
Travis C CollierVector Genetics Lab, University of California DavisVerified email at ucdavis.edu
David B. KnoesterAmazon.comVerified email at amazon.com
Luis ZamanAssistant Professor in EEB and Complex SystemsVerified email at umich.edu
Michael WiserBEACON, Michigan State UniversityVerified email at msu.edu
Anya E VostinarCarleton CollegeVerified email at carleton.edu
Andreas WagnerUniversity of ZurichVerified email at ieu.uzh.ch
Eric TorngMichigan State UniversityVerified email at cse.msu.edu
Santiago F. ElenaProfessor, CSICVerified email at uv.es
Dusan MisevicCenter for Research and Interdisciplinarity, ParisVerified email at alife.org
Kenneth O. StanleyResearch Manager, OpenAIVerified email at openai.com
Benjamin KerrProfessor of Biology, University of WashingtonVerified email at uw.edu

Charles Ofria

Michigan State University

Verified email at cse.msu.edu - Homepage

Artificial Life Digital Evolution Evolutionary Computation Bio-Inspired Computing Evolutionary Biology


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The evolutionary origin of complex features RE Lenski, C Ofria, RT Pennock, C Adami Nature 423 (6936), 139-144, 2003	823	2003
Perspective: evolution and detection of genetic robustness JAGM De Visser, J Hermisson, GP Wagner, LA Meyers, ... Evolution 57 (9), 1959-1972, 2003	750	2003
Evolution of digital organisms at high mutation rates leads to survival of the flattest CO Wilke, JL Wang, C Ofria, RE Lenski, C Adami Nature 412 (6844), 331-333, 2001	715	2001
Evolution of biological complexity C Adami, C Ofria, TC Collier Proceedings of the National Academy of Sciences 97 (9), 4463-4468, 2000	699	2000
Avida: A software platform for research in computational evolutionary biology C Ofria, CO Wilke Artificial life 10 (2), 191-229, 2004	482	2004
Genome complexity, robustness and genetic interactions in digital organisms RE Lenski, C Ofria, TC Collier, C Adami Nature 400 (6745), 661-664, 1999	401	1999
Balancing robustness and evolvability RE Lenski, JE Barrick, C Ofria, S Levin PLoS biology 4 (12), e428, 2006	241	2006
The surprising creativity of digital evolution: A collection of anecdotes from the evolutionary computation and artificial life research communities J Lehman, J Clune, D Misevic, C Adami, L Altenberg, J Beaulieu, ... Artificial life 26 (2), 274-306, 2020	238	2020
Evolving coordinated quadruped gaits with the HyperNEAT generative encoding J Clune, BE Beckmann, C Ofria, RT Pennock 2009 iEEE congress on evolutionary computation, 2764-2771, 2009	217	2009
Adaptive radiation from resource competition in digital organisms SS Chow, CO Wilke, C Ofria, RE Lenski, C Adami Science 305 (5680), 84-86, 2004	172	2004
On the performance of indirect encoding across the continuum of regularity J Clune, KO Stanley, RT Pennock, C Ofria IEEE Transactions on Evolutionary Computation 15 (3), 346-367, 2011	167	2011
Sexual reproduction reshapes the genetic architecture of digital organisms D Misevic, C Ofria, RE Lenski Proceedings of the Royal Society B: Biological Sciences 273 (1585), 457-464, 2006	139	2006
Natural selection fails to optimize mutation rates for long-term adaptation on rugged fitness landscapes J Clune, D Misevic, C Ofria, RE Lenski, SF Elena, R Sanjuán PLoS Computational Biology 4 (9), e1000187, 2008	133	2008
Open-ended evolution: Perspectives from the OEE workshop in York T Taylor, M Bedau, A Channon, D Ackley, W Banzhaf, G Beslon, E Dolson, ... Artificial life 22 (3), 408-423, 2016	117	2016
Task-switching costs promote the evolution of division of labor and shifts in individuality HJ Goldsby, A Dornhaus, B Kerr, C Ofria Proceedings of the National Academy of Sciences 109 (34), 13686-13691, 2012	116	2012
Distributed cooperative caching in social wireless networks M Taghizadeh, K Micinski, S Biswas, C Ofria, E Torng IEEE Transactions on Mobile Computing 12 (6), 1037-1053, 2012	111	2012
Coevolution drives the emergence of complex traits and promotes evolvability L Zaman, JR Meyer, S Devangam, DM Bryson, RE Lenski, C Ofria PLoS Biology 12 (12), e1002023, 2014	106	2014
Experiments on the role of deleterious mutations as stepping stones in adaptive evolution AW Covert III, RE Lenski, CO Wilke, C Ofria Proceedings of the National Academy of Sciences 110 (34), E3171-E3178, 2013	91	2013
Effects of population size and mutation rate on the evolution of mutational robustness SF Elena, CO Wilke, C Ofria, RE Lenski Evolution 61 (3), 666-674, 2007	76	2007
Evolving digital ecological networks MA Fortuna, L Zaman, AP Wagner, C Ofria PLoS computational biology 9 (3), e1002928, 2013	75	2013

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