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Chanaka Mannapperuma
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The plant genome integrative explorer resource: PlantGenIE. org
D Sundell, C Mannapperuma, S Netotea, N Delhomme, YC Lin, A Sjödin, ...
New Phytologist 208 (4), 1149-1156, 2015
2202015
High-spatial-resolution transcriptome profiling reveals uncharacterized regulatory complexity underlying cambial growth and wood formation in Populus tremula
D Sundell, NR Street, M Kumar, EJ Mellerowicz, M Kucukoglu, ...
167*2016
Spatially resolved transcriptome profiling in model plant species
S Giacomello, F Salmén, BK Terebieniec, S Vickovic, JF Navarro, ...
Nature Plants 3 (6), 1-11, 2017
992017
Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen
YC Lin, J Wang, N Delhomme, B Schiffthaler, G Sundström, A Zuccolo, ...
Proceedings of the National Academy of Sciences 115 (46), E10970-E10978, 2018
592018
Chromosome-level genome assembly of a parent species of widely cultivated azaleas
FS Yang, S Nie, H Liu, TL Shi, XC Tian, SS Zhou, YT Bao, KH Jia, JF Guo, ...
Nature communications 11 (1), 1-13, 2020
392020
Transcriptional roadmap to seasonal variation in wood formation of Norway spruce
S Jokipii-Lukkari, N Delhomme, B Schiffthaler, C Mannapperuma, ...
Plant physiology 176 (4), 2851-2870, 2018
322018
Guidelines for RNA-Seq data analysis
N Delhomme, N Mähler, B Schiffthaler, D Sundell, C Mannapperuma, ...
Epigenesys Protoc 67, 1-24, 2014
292014
Poplar carbohydrate‐active enzymes: whole‐genome annotation and functional analyses based on RNA expression data
V Kumar, M Hainaut, N Delhomme, C Mannapperuma, P Immerzeel, ...
The Plant Journal 99 (4), 589-609, 2019
252019
Cyberinfrastructure to improve forest health and productivity: the role of tree databases in connecting genomes, phenomes, and the environment
JL Wegrzyn, MA Staton, NR Street, D Main, E Grau, N Herndon, S Buehler, ...
Frontiers in plant science, 813, 2019
212019
Leaf shape in Populus tremula is a complex, omnigenic trait
N Mähler, B Schiffthaler, KM Robinson, BK Terebieniec, M Vučak, ...
Ecology and evolution 10 (21), 11922-11940, 2020
112020
Genome-Wide Identification of Populus Malectin/Malectin-Like Domain-Containing Proteins and Expression Analyses Reveal Novel Candidates for Signaling and …
V Kumar, EN Donev, FR Barbut, S Kushwah, C Mannapperuma, ...
Frontiers in plant science 11, 588846, 2020
72020
Designing usable Bioinformatics Tools for specialized users
C Mannapperuma, N Street, J Waterworth
International Conference on Information Technology & Systems, 649-670, 2019
62019
The BOP‐type co‐transcriptional regulator NODULE ROOT1 promotes stem secondary growth of the tropical Cannabaceae tree Parasponia andersonii
D Shen, R Holmer, O Kulikova, C Mannapperuma, NR Street, Z Yan, ...
The Plant Journal 106 (5), 1366-1386, 2021
22021
GenIE-Sys: Genome integrative explorer system
C Mannapperuma, J Waterworth, N Street
bioRxiv, 808881, 2019
22019
Identification of growth regulators using cross-species network analysis in plants
PL Curci, J Zhang, N Mähler, C Seyfferth, C Mannapperuma, T Diels, ...
12022
qtlXplorer: an online systems genetics browser in the Eucalyptus Genome Integrative Explorer (EucGenIE)
N Christie, C Mannapperuma, R Ployet, K van der Merwe, N Mähler, ...
BMC bioinformatics 22 (1), 1-21, 2021
12021
Centromere-Specific Retrotransposons and Very-Long-Chain Fatty Acid Biosynthesis in the Genome of Yellowhorn (Xanthoceras sorbifolium, Sapindaceae), an Oil-Producing Tree With …
H Liu, XM Yan, X Wang, DX Zhang, Q Zhou, TL Shi, KH Jia, XC Tian, ...
Frontiers in plant science, 2546, 2021
12021
PlantGenIE-PLAZA: Integrating orthology into the plantgenie. org resource using the plaza pipeline
C Mannapperuma, H Liu, M Bel, N Delhomme, A Serrano, B Schiffthaler, ...
12020
Identification of new leaf intrinsic yield genes using cross-species network analysis in plants
PL Curci, J Zhang, N Mähler, C Seyfferth, C Mannapperuma, T Diels, ...
bioRxiv, 2021
2021
Human-computer interaction principles for developing web-based genomics resources
C Mannapperuma
Umeå Universitet, 2020
2020
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Artikelen 1–20