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Jonathan Fogg
Jonathan Fogg
Senior Staff Scientist, Baylor College of Medicine
Verified email at bcm.edu
Title
Cited by
Cited by
Year
Structural diversity of supercoiled DNA
RN Irobalieva, JM Fogg, DJ Catanese Jr, T Sutthibutpong, M Chen, ...
Nature communications 6 (1), 8440, 2015
1812015
Simultaneous DNA binding and bending by EcoRV endonuclease observed by real-time fluorescence
DA Hiller, JM Fogg, AM Martin, JM Beechem, NO Reich, JJ Perona
Biochemistry 42 (49), 14375-14385, 2003
882003
Exploring writhe in supercoiled minicircle DNA
JM Fogg, N Kolmakova, I Rees, S Magonov, H Hansma, JJ Perona, ...
Journal of Physics: Condensed Matter 18 (14), S145, 2006
842006
Bullied no more: when and how DNA shoves proteins around
JM Fogg, GL Randall, BM Pettitt, LS De Witt, SA Harris, L Zechiedrich
Quarterly reviews of biophysics 45 (3), 257-299, 2012
772012
Supercoiled Minivector DNA resists shear forces associated with gene therapy delivery
DJ Catanese, JM Fogg, DE Schrock, BE Gilbert, L Zechiedrich
Gene therapy 19 (1), 94-100, 2012
712012
The complex between a four‐way DNA junction and T7 endonuclease I
AC Déclais, JM Fogg, ADJ Freeman, F Coste, JM Hadden, SEV Phillips, ...
The EMBO Journal, 2003
652003
Ensuring productive resolution by the junction-resolving enzyme RuvC: large enhancement of the second-strand cleavage rate
JM Fogg, DMJ Lilley
Biochemistry 39 (51), 16125-16134, 2000
622000
Transfection of shRNA-encoding Minivector DNA of a few hundred base pairs to regulate gene expression in lymphoma cells
N Zhao, JM Fogg, L Zechiedrich, Y Zu
Gene therapy 18 (3), 220-224, 2011
582011
Yeast resolving enzyme CCE1 makes sequential cleavages in DNA junctions within the lifetime of the complex
JM Fogg, MJ Schofield, AC Déclais, DMJ Lilley
Biochemistry 39 (14), 4082-4089, 2000
512000
Distortion of DNA junctions imposed by the binding of resolving enzymes: a fluorescence study
JM Fogg, M Kvaratskhelia, MF White, DMJ Lilley
Journal of Molecular Biology 313 (4), 751-764, 2001
452001
Sequence and functional-group specificity for cleavage of DNA junctions by RuvC of Escherichia coli
JM Fogg, MJ Schofield, MF White, DMJ Lilley
Biochemistry 38 (35), 11349-11358, 1999
431999
Influence of DNA sequence on the structure of minicircles under torsional stress
Q Wang, RN Irobalieva, W Chiu, MF Schmid, JM Fogg, L Zechiedrich, ...
Nucleic acids research 45 (13), 7633-7642, 2017
312017
Differences between positively and negatively supercoiled DNA that topoisomerases may distinguish
JM Fogg, DJ Catanese, GL Randall, MC Swick, L Zechiedrich
Mathematics of DNA structure, function and interactions, 73-121, 2009
252009
Holliday junction resolution is modulated by archaeal chromatin components in vitro
M Kvaratskhelia, BN Wardleworth, CS Bond, JM Fogg, DMJ Lilley, ...
Journal of Biological Chemistry 277 (4), 2992-2996, 2002
252002
Supercoiling and looping promote DNA base accessibility and coordination among distant sites
JM Fogg, A Judge, E Stricker, HL Chan, EL Zechiedrich
Biophysical Journal 120 (3), 221a-222a, 2021
232021
TopA, the Sulfolobus solfataricus topoisomerase III, is a decatenase
AH Bizard, X Yang, H Débat, JM Fogg, L Zechiedrich, TR Strick, F Garnier, ...
Nucleic acids research 46 (2), 861-872, 2018
182018
Supercoiled MiniVectors as a Tool for DNA Repair, Alteration and Replacement
LE Zechiedrich, J Fogg, DJ Catanese, E Bakkalbasi, N Maizel, O Humbert
US Patent App. 13/906,130, 2014
122014
Improving therapeutic potential of non-viral minimized DNA vectors
LM Arévalo-Soliz, CL Hardee, JM Fogg, NR Corman, C Noorbakhsh, ...
Cell & gene therapy insights 6 (10), 1489, 2020
92020
Generation of minicircle DNA with physiological supercoiling
EL Zechiedrich, J Fogg, J Perona
US Patent 7,622,252, 2009
72009
DNA supercoiling-induced shapes alter minicircle hydrodynamic properties
R Waszkiewicz, M Ranasinghe, JM Fogg, DJ Catanese Jr, ...
Nucleic acids research 51 (8), 4027-4042, 2023
52023
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