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Scott T. Kelley
Scott T. Kelley
Professor of Biology, San Diego State University
Verified email at mail.sdsu.edu
Title
Cited by
Cited by
Year
QIIME allows analysis of high-throughput community sequencing data
JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ...
Nature methods 7 (5), 335-336, 2010
285682010
Structure, function and diversity of the healthy human microbiome
Human Microbiome Project Consortium
nature 486 (7402), 207, 2012
80902012
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
52552019
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
nature 486 (7402), 215, 2012
19292012
Quantitative and qualitative β diversity measures lead to different insights into factors that structure microbial communities
CA Lozupone, M Hamady, ST Kelley, R Knight
Applied and environmental microbiology 73 (5), 1576-1585, 2007
18612007
Isolation by distance, web service
JL Jensen, AJ Bohonak, ST Kelley
BMC genetics 6 (1), 1-6, 2005
16972005
The marine viromes of four oceanic regions
FE Angly, B Felts, M Breitbart, P Salamon, RA Edwards, C Carlson, ...
PLoS biology 4 (11), e368, 2006
10662006
Metabolic reconstruction for metagenomic data and its application to the human microbiome
S Abubucker, N Segata, J Goll, AM Schubert, J Izard, BL Cantarel, ...
PLoS computational biology 8 (6), e1002358, 2012
9882012
Bayesian community-wide culture-independent microbial source tracking
D Knights, J Kuczynski, ES Charlson, J Zaneveld, MC Mozer, RG Collman, ...
Nature methods 8 (9), 761-763, 2011
9632011
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
7222018
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ...
Nature biotechnology 29 (5), 415-420, 2011
5592011
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), e00031-18, 2018
3792018
IS SPECIALIZATION A DEAD END? THE PHYLOGENY OF HOST USE IN DENDROCTONUS BARK BEETLES (SCOLYTIDAE)
ST Kelley, BD Farrell
Evolution 52 (6), 1731-1743, 1998
3711998
Diversity and population structure of a near–shore marine–sediment viral community
M Breitbart, B Felts, S Kelley, JM Mahaffy, J Nulton, P Salamon, F Rohwer
Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2004
3662004
Viral diversity and dynamics in an infant gut
M Breitbart, M Haynes, S Kelley, F Angly, RA Edwards, B Felts, ...
Research in microbiology 159 (5), 367-373, 2008
3402008
Phylogenetic classification of short environmental DNA fragments
L Krause, NN Diaz, A Goesmann, S Kelley, TW Nattkemper, F Rohwer, ...
Nucleic acids research 36 (7), 2230-2239, 2008
3402008
Biodiversity and biogeography of phages in modern stromatolites and thrombolites
C Desnues, B Rodriguez-Brito, S Rayhawk, S Kelley, T Tran, M Haynes, ...
Nature 452 (7185), 340-343, 2008
2842008
The genetic core of the universal ancestor
JK Harris, ST Kelley, GB Spiegelman, NR Pace
Genome research 13 (3), 407-412, 2003
2842003
Rapid development of multiple nuclear loci for phylogenetic analysis using genomic resources: an example from squamate reptiles
TM Townsend, RE Alegre, ST Kelley, JJ Wiens, TW Reeder
Molecular phylogenetics and evolution 47 (1), 129-142, 2008
2772008
Murine noroviruses comprising a single genogroup exhibit biological diversity despite limited sequence divergence
LB Thackray, CE Wobus, KA Chachu, B Liu, ER Alegre, KS Henderson, ...
Journal of virology 81 (19), 10460-10473, 2007
2712007
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