A community effort to assess and improve drug sensitivity prediction algorithms et al James C. Costello Nature Biotechnology, 2014 | 655 | 2014 |
The REMBRANDT study, a large collection of genomic data from brain cancer patients Y Gusev, K Bhuvaneshwar, L Song, JC Zenklusen, H Fine, S Madhavan Scientific data 5 (1), 1-9, 2018 | 113 | 2018 |
βII‐Spectrin (SPTBN1) suppresses progression of hepatocellular carcinoma and Wnt signaling by regulation of Wnt inhibitor kallistatin X Zhi, L Lin, S Yang, K Bhuvaneshwar, H Wang, Y Gusev, MH Lee, ... Hepatology 61 (2), 598-612, 2015 | 86 | 2015 |
G-DOC: a systems medicine platform for personalized oncology S Madhavan, Y Gusev, M Harris, DM Tanenbaum, R Gauba, ... Neoplasia 13 (9), 771-783, 2011 | 72 | 2011 |
The long noncoding RNA CCAT2 induces chromosomal instability through BOP1-AURKB signaling B Chen, MP Dragomir, L Fabris, R Bayraktar, E Knutsen, X Liu, C Tang, ... Gastroenterology 159 (6), 2146-2162. e33, 2020 | 57 | 2020 |
G-DOC Plus–an integrative bioinformatics platform for precision medicine K Bhuvaneshwar, A Belouali, V Singh, RM Johnson, L Song, A Alaoui, ... BMC Bioinformatics 17 (1), 1-13, 2016 | 44 | 2016 |
Transcriptional regulation of STAT3 by SPTBN1 and SMAD3 in HCC through cAMP-response element-binding proteins ATF3 and CREB2 L Lin, Z Yao, K Bhuvaneshwar, Y Gusev, B Kallakury, S Yang, K Shetty, ... Carcinogenesis 35 (11), 2393-2403, 2014 | 40 | 2014 |
Pharmacogenomic characterization of gemcitabine response–a framework for data integration to enable personalized medicine M Harris, K Bhuvaneshwar, T Natarajan, L Sheahan, D Wang, ... Pharmacogenetics and genomics 24 (2), 81-93, 2014 | 36 | 2014 |
Genome-wide multi-omics profiling of colorectal cancer identifies immune determinants strongly associated with relapse S Madhavan, Y Gusev, TG Natarajan, L Song, K Bhuvaneshwar, R Gauba, ... Frontiers in genetics 4, 236, 2013 | 32 | 2013 |
A case study for cloud based high throughput analysis of NGS data using the globus genomics system K Bhuvaneshwar, D Sulakhe, R Gauba, A Rodriguez, R Madduri, U Dave, ... Computational and Structural Biotechnology Journal 13, 64-74, 2014 | 31 | 2014 |
EGR1 regulates cellular metabolism and survival in endocrine resistant breast cancer AN Shajahan-Haq, SM Boca, L Jin, K Bhuvaneshwar, Y Gusev, ... Oncotarget, 2017 | 28 | 2017 |
viGEN: An open source pipeline for the detection and quantification of viral RNA in human tumors K Bhuvaneshwar, L Song, S Madhavan, Y Gusev Frontiers in Microbiology 9, 1172, 2018 | 17 | 2018 |
Type 3 innate lymphoid cells are associated with a successful intestinal transplant J Kang, K Loh, L Belyayev, P Cha, M Sadat, K Khan, Y Gusev, ... American Journal of Transplantation, 2020 | 15 | 2020 |
Genome sequencing analysis of blood cells identifies germline haplotypes strongly associated with drug resistance in osteosarcoma patients K Bhuvaneshwar, M Harris, Y Gusev, S Madhavan, R Iyer, T Vilboux, ... BMC cancer 19 (1), 1-16, 2019 | 14 | 2019 |
In silico discovery of mitosis regulation networks associated with early distant metastases in estrogen receptor positive breast cancers Y Gusev, RB Riggins, K Bhuvaneshwar, R Gauba, L Sheahan, R Clarke, ... Cancer informatics 12, 31, 2013 | 13 | 2013 |
Dynamic Regulation of Caveolin-1 Phosphorylation and Caveolae Formation by Mammalian Target of Rapamycin Complex 2 in Bladder Cancer Cells AM Hau, S Gupta, MZ Leivo, K Nakashima, J Macias, W Zhou, A Hodge, ... The American journal of pathology 189 (9), 1846-1862, 2019 | 12 | 2019 |
Molecular predictors of response to pembrolizumab in thymic carcinoma Y He, A Ramesh, Y Gusev, K Bhuvaneshwar, G Giaccone Cell Reports Medicine 2 (9), 100392, 2021 | 11 | 2021 |
SPTBN1 inhibits inflammatory responses and hepatocarcinogenesis via the stabilization of SOCS1 and downregulation of p65 in hepatocellular carcinoma L Lin, S , Chen, H Wang, B Gao, B Kallakury, K Bhuvaneshwar, K Cahn, ... Theranostics 11 (9), 4232–4250, 2021 | 11 | 2021 |
Translational bioinformatics in mental health: open access data sources and computational biomarker discovery JD Tenenbaum, K Bhuvaneshwar, JP Gagliardi, K Fultz Hollis, P Jia, L Ma, ... Briefings in bioinformatics 20 (3), 842-856, 2019 | 10 | 2019 |
CINdex: A Bioconductor Package for Analysis of Chromosome Instability in DNA Copy Number Data L Song, K Bhuvaneshwar, Y Wang, Y Feng, IM Shih, S Madhavan, ... Cancer Informatics 16, 1176935117746637, 2017 | 10 | 2017 |