|A community effort to assess and improve drug sensitivity prediction algorithms|
et al James C. Costello
Nature Biotechnology, 2014
|The REMBRANDT study, a large collection of genomic data from brain cancer patients|
Y Gusev, K Bhuvaneshwar, L Song, JC Zenklusen, H Fine, S Madhavan
Scientific data 5 (1), 1-9, 2018
|βII‐Spectrin (SPTBN1) suppresses progression of hepatocellular carcinoma and Wnt signaling by regulation of Wnt inhibitor kallistatin|
X Zhi, L Lin, S Yang, K Bhuvaneshwar, H Wang, Y Gusev, MH Lee, ...
Hepatology 61 (2), 598-612, 2015
|G-DOC: a systems medicine platform for personalized oncology|
S Madhavan, Y Gusev, M Harris, DM Tanenbaum, R Gauba, ...
Neoplasia 13 (9), 771-783, 2011
|The long noncoding RNA CCAT2 induces chromosomal instability through BOP1-AURKB signaling|
B Chen, MP Dragomir, L Fabris, R Bayraktar, E Knutsen, X Liu, C Tang, ...
Gastroenterology 159 (6), 2146-2162. e33, 2020
|G-DOC Plus–an integrative bioinformatics platform for precision medicine|
K Bhuvaneshwar, A Belouali, V Singh, RM Johnson, L Song, A Alaoui, ...
BMC Bioinformatics 17 (1), 1-13, 2016
|Transcriptional regulation of STAT3 by SPTBN1 and SMAD3 in HCC through cAMP-response element-binding proteins ATF3 and CREB2|
L Lin, Z Yao, K Bhuvaneshwar, Y Gusev, B Kallakury, S Yang, K Shetty, ...
Carcinogenesis 35 (11), 2393-2403, 2014
|Pharmacogenomic characterization of gemcitabine response–a framework for data integration to enable personalized medicine|
M Harris, K Bhuvaneshwar, T Natarajan, L Sheahan, D Wang, ...
Pharmacogenetics and genomics 24 (2), 81-93, 2014
|Genome-wide multi-omics profiling of colorectal cancer identifies immune determinants strongly associated with relapse|
S Madhavan, Y Gusev, TG Natarajan, L Song, K Bhuvaneshwar, R Gauba, ...
Frontiers in genetics 4, 236, 2013
|A case study for cloud based high throughput analysis of NGS data using the globus genomics system|
K Bhuvaneshwar, D Sulakhe, R Gauba, A Rodriguez, R Madduri, U Dave, ...
Computational and Structural Biotechnology Journal 13, 64-74, 2014
|EGR1 regulates cellular metabolism and survival in endocrine resistant breast cancer|
AN Shajahan-Haq, SM Boca, L Jin, K Bhuvaneshwar, Y Gusev, ...
|viGEN: An open source pipeline for the detection and quantification of viral RNA in human tumors|
K Bhuvaneshwar, L Song, S Madhavan, Y Gusev
Frontiers in Microbiology 9, 1172, 2018
|Type 3 innate lymphoid cells are associated with a successful intestinal transplant|
J Kang, K Loh, L Belyayev, P Cha, M Sadat, K Khan, Y Gusev, ...
American Journal of Transplantation, 2020
|Genome sequencing analysis of blood cells identifies germline haplotypes strongly associated with drug resistance in osteosarcoma patients|
K Bhuvaneshwar, M Harris, Y Gusev, S Madhavan, R Iyer, T Vilboux, ...
BMC cancer 19 (1), 1-16, 2019
|In silico discovery of mitosis regulation networks associated with early distant metastases in estrogen receptor positive breast cancers|
Y Gusev, RB Riggins, K Bhuvaneshwar, R Gauba, L Sheahan, R Clarke, ...
Cancer informatics 12, 31, 2013
|Dynamic Regulation of Caveolin-1 Phosphorylation and Caveolae Formation by Mammalian Target of Rapamycin Complex 2 in Bladder Cancer Cells|
AM Hau, S Gupta, MZ Leivo, K Nakashima, J Macias, W Zhou, A Hodge, ...
The American journal of pathology 189 (9), 1846-1862, 2019
|Molecular predictors of response to pembrolizumab in thymic carcinoma|
Y He, A Ramesh, Y Gusev, K Bhuvaneshwar, G Giaccone
Cell Reports Medicine 2 (9), 100392, 2021
|SPTBN1 inhibits inflammatory responses and hepatocarcinogenesis via the stabilization of SOCS1 and downregulation of p65 in hepatocellular carcinoma|
L Lin, S , Chen, H Wang, B Gao, B Kallakury, K Bhuvaneshwar, K Cahn, ...
Theranostics 11 (9), 4232–4250, 2021
|Translational bioinformatics in mental health: open access data sources and computational biomarker discovery|
JD Tenenbaum, K Bhuvaneshwar, JP Gagliardi, K Fultz Hollis, P Jia, L Ma, ...
Briefings in bioinformatics 20 (3), 842-856, 2019
|CINdex: A Bioconductor Package for Analysis of Chromosome Instability in DNA Copy Number Data|
L Song, K Bhuvaneshwar, Y Wang, Y Feng, IM Shih, S Madhavan, ...
Cancer Informatics 16, 1176935117746637, 2017