Maciej Antczak

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Marta SzachniukInstitute of Computing Science, Poznan University of TechnologyGeverifieerd e-mailadres voor cs.put.poznan.pl
Jacek BlazewiczProfesor informatyki, Politechnika PoznanskaGeverifieerd e-mailadres voor cs.put.poznan.pl
Mariusz PopendaDr chemii, PANGeverifieerd e-mailadres voor ibch.poznan.pl
Piotr LukasiakAssociate Professor, Institute of Computing Science, Poznan University of TechnologyGeverifieerd e-mailadres voor put.poznan.pl
Tomasz ZokPoznan University of TechnologyGeverifieerd e-mailadres voor cs.put.poznan.pl
Szymon WasikGoogle CloudGeverifieerd e-mailadres voor google.com
Tomasz RatajczakAssistant at Institute of Computing Science, Poznan University of TechnologyGeverifieerd e-mailadres voor cs.put.poznan.pl
Janusz BujnickiProfessor of Biology, International Institute of Molecular and Cell Biology in WarsawGeverifieerd e-mailadres voor iimcb.gov.pl
Agnieszka RybarczykPoznan University of Technology; Gdynia Maritime UniversityGeverifieerd e-mailadres voor cs.put.poznan.pl
Maciej MiłostanPoznan University of Technology, Institute of Computing ScienceGeverifieerd e-mailadres voor cs.put.poznan.pl
Thomas VillmannProfessor for Mathematics and Computational Intelligence, University of Applied Sciences MittweidaGeverifieerd e-mailadres voor hs-mittweida.de
Andriy KryshtafovychUniversity of California, DavisGeverifieerd e-mailadres voor ucdavis.edu
Natalia SzóstakInstitute of Bioorganic Chemistry Polish Academy of SciencesGeverifieerd e-mailadres voor ibch.poznan.pl
Marta KasprzakPoznan University of Technology, Institute of Computing ScienceGeverifieerd e-mailadres voor put.poznan.pl
David NebelCI Group MittweidaGeverifieerd e-mailadres voor hs-mittweida.de

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Maciej Antczak

Associate Professor at Institute of Computing Science, Poznan University of Technology

Geverifieerd e-mailadres voor cs.put.poznan.pl - Homepage

Bioinformatics Scientific Computing Operations Research Combinatorial Optimization


Titel Sorteren op citaties Sorteren op jaar Sorteren op titel	Geciteerd door Geciteerd door	Jaar
Automated 3D structure composition for large RNAs M Popenda, M Szachniuk, M Antczak, KJ Purzycka, P Lukasiak, N Bartol, ... Nucleic acids research 40 (14), e112, 2012	622	2012
A Survey on Online Judge Systems and Their Applications S Wasik, M Antczak, A Laskowski, T Sternal ACM Computing Surveys 51 (1), 3:1-3:34, 2018	204	2018
RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme Z Miao, RW Adamiak, M Antczak, RT Batey, AJ Becka, M Biesiada, ... Rna 23 (5), 655-672, 2017	172	2017
New functionality of RNAComposer: application to shape the axis of miR160 precursor structure M Antczak, M Popenda, T Zok, J Sarzynska, T Ratajczak, K Tomczyk, ... Acta Biochimica Polonica 63 (4), 737–744, 2016	162	2016
RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers Z Miao, RW Adamiak, M Antczak, MJ Boniecki, J Bujnicki, SJ Chen, ... RNA 26 (8), 982-995, 2020	91	2020
RNApdbee 2.0: multifunctional tool for RNA structure annotation T Zok, M Antczak, M Zurkowski, M Popenda, J Blazewicz, RW Adamiak, ... Nucleic acids research 46 (W1), W30-W35, 2018	91	2018
RNApdbee—a webserver to derive secondary structures from pdb files of knotted and unknotted RNAs M Antczak, T Zok, M Popenda, P Lukasiak, RW Adamiak, J Blazewicz, ... Nucleic acids research 42 (W1), W368-W372, 2014	74	2014
RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools M Magnus, M Antczak, T Zok, J Wiedemann, P Lukasiak, Y Cao, ... Nucleic acids research 48 (2), 576-588, 2020	50	2020
Automated 3D RNA structure prediction using the RNAComposer method for Riboswitches1 KJ Purzycka, M Popenda, M Szachniuk, M Antczak, P Lukasiak, ... Methods in enzymology 553, 3-34, 2015	48	2015
New in silico approach to assessing RNA secondary structures with non-canonical base pairs A Rybarczyk, N Szostak, M Antczak, T Zok, M Popenda, R Adamiak, ... BMC Bioinformatics 16 (1), 276, 2015	35	2015
New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation M Antczak, M Popenda, T Zok, M Zurkowski, RW Adamiak, M Szachniuk Bioinformatics 34 (8), 1304-1312, 2018	32	2018
RNAlyzer—novel approach for quality analysis of RNA structural models P Lukasiak, M Antczak, T Ratajczak, JM Bujnicki, M Szachniuk, ... Nucleic Acids Research 41 (12), 5978-5990, 2013	28	2013
RNAssess—a web server for quality assessment of RNA 3D structures P Lukasiak, M Antczak, T Ratajczak, M Szachniuk, M Popenda, ... Nucleic acids research 43 (W1), W502-506, 2015	25	2015
SphereGrinder - reference structure-based tool for quality assessment of protein structural models P Lukasiak, M Antczak, T Ratajczak, J Blazewicz Proceedings of the 2015 IEEE International Conference on Bioinformatics and …, 2015	24	2015
Optil.io: Cloud Based Platform For Solving Optimization Problems Using Crowdsourcing Approach S Wasik, M Antczak, J Badura, A Laskowski, T Sternal Proceedings of the 19th ACM Conference on Computer Supported Cooperative …, 2016	20	2016
RNAvista: a webserver to assess RNA secondary structures with non-canonical base pairs M Antczak, M Zablocki, T Zok, A Rybarczyk, J Blazewicz, M Szachniuk Bioinformatics 35 (1), 152-155, 2019	16	2019
RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures M Antczak, T Zok, M Osowiecki, M Popenda, RW Adamiak, M Szachniuk BMC bioinformatics 19 (1), 1-11, 2018	12	2018
Evaluation of the stereochemical quality of predicted RNA 3D models in the RNA-Puzzles submissions F Carrascoza, M Antczak, Z Miao, E Westhof, M Szachniuk Rna 28 (2), 250-262, 2022	11	2022
Entanglements of structure elements revealed in RNA 3D models M Popenda, T Zok, J Sarzynska, A Korpeta, RW Adamiak, M Antczak, ... Nucleic Acids Research 49 (17), 9625-9632, 2021	10	2021
Building the library of RNA 3D nucleotide conformations using the clustering approach T Zok, M Antczak, M Riedel, D Nebel, T Villmann, P Lukasiak, J Blazewicz, ... International Journal of Applied Mathematics and Computer Science 25 (3 …, 2015	10	2015

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