Diego U. Ferreiro

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Peter G. WolynesBullard-Welch Foundation Professor of Science, Professor of Chemistry, Professor of PhysicsVerified email at rice.edu
Elizabeth KomivesDistinguished Professor, Chemistry and Biochemistry UC San DiegoVerified email at ucsd.edu
R. Gonzalo ParraSenior Postdoctoral Researcher, Barcelona Supercomputing CenterVerified email at bsc.es
Gonzalo de Prat GayHead, Protein Structure-Function and Engineering Lab, Fundación Instituto Leloir-CONICET, ArgentinaVerified email at leloir.org.ar
Ignacio Enrique SanchezCONICET researcher, Universidad de Buenos Aires (Argentina)Verified email at qb.fcen.uba.ar
Rocío EspadaPostdoc at ESPCIVerified email at espci.fr
Maria Ines Freiberger (ORCID 0000-0...Laboratorio de Fisiología de Proteínas, Facultad de Ciencias Exactas Físicas y NaturalesVerified email at qb.fcen.uba.ar
Alejandro Daniel NadraUBA - CONICETVerified email at qi.fcen.uba.ar
Aleksandra WalczakLaboratoire de physique théorique, École normale supérieureVerified email at lpt.ens.fr
Leandro RaduskyManas.techVerified email at manas.tech
A. Brenda GuzovskyPhD Fellow at IQUIBICEN- Departamento de Quìmica Biológica, CONICET-FCEyN, UBAVerified email at qb.fcen.uba.ar
Thierry MoraLaboratoire de physique de l'École normale supérieure, Centre national de recherche scientifiqueVerified email at phys.ens.fr
Nicholas P SchaferConstantiam BiosciencesVerified email at constantiambio.com
Anke BeckerUniversity of MarburgVerified email at synmikro.uni-marburg.de
MONIKA FUXREITERprofessor, University of PadovaVerified email at unipd.it
Ezequiel Alejandro GalpernProtein Physiology Lab, Universidad de Buenos Aires, Facultad de Ciencias Exactas y NaturalesVerified email at qb.fcen.uba.ar
Samuel S. ChoDepartments of Physics and Computer Science, Wake Forest UniversityVerified email at wfu.edu
Alfred PühlerCentrum für Biotechnologie, Universität BielefeldVerified email at cebitec.uni-bielefeld.de
Fernando Alberto GoldbaumUniversity of San MartinVerified email at inmunova.com
Nina VerstraeteEpigenomics and network modelling of heterogeneity in immuno-oncology @CRCT INSERM UMR1037Verified email at inserm.fr

Diego U. Ferreiro

CONICET, FCEyN, Universidad de Buenos Aires

Verified email at qb.fcen.uba.ar - Homepage

Protein Physiology: structure dynamics function evolution da-capo


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Localizing frustration in native proteins and protein assemblies DU Ferreiro, JA Hegler, EA Komives, PG Wolynes Proceedings of the National Academy of Sciences 104 (50), 19819-19824, 2007	332	2007
Xanthomonas campestris pv. campestrisgum Mutants: Effects on Xanthan Biosynthesis and Plant Virulence F Katzen, DU Ferreiro, CG Oddo, MV Ielmini, A Becker, A Pühler, L Ielpi Journal of bacteriology 180 (7), 1607-1617, 1998	312	1998
Frustration in biomolecules DU Ferreiro, EA Komives, PG Wolynes Quarterly reviews of biophysics 47 (4), 285-363, 2014	261	2014
On the role of frustration in the energy landscapes of allosteric proteins DU Ferreiro, JA Hegler, EA Komives, PG Wolynes Proceedings of the National Academy of Sciences 108 (9), 3499-3503, 2011	198	2011
Protein Frustratometer 2: a tool to localize energetic frustration in protein molecules, now with electrostatics RG Parra, NP Schafer, LG Radusky, MY Tsai, AB Guzovsky, PG Wolynes, ... Nucleic acids research 44 (W1), W356-W360, 2016	176	2016
Protein frustratometer: a tool to localize energetic frustration in protein molecules M Jenik, RG Parra, LG Radusky, A Turjanski, PG Wolynes, DU Ferreiro Nucleic acids research 40 (W1), W348-W351, 2012	164	2012
Molecular mechanisms of system control of NF-κB signaling by IκBα DU Ferreiro, EA Komives Biochemistry 49 (8), 1560-1567, 2010	158	2010
Consequences of localized frustration for the folding mechanism of the IM7 protein L Sutto, J Lätzer, JA Hegler, DU Ferreiro, PG Wolynes Proceedings of the National Academy of Sciences 104 (50), 19825-19830, 2007	109	2007
Folding landscapes of ankyrin repeat proteins: experiments meet theory D Barrick, DU Ferreiro, EA Komives Current opinion in structural biology 18 (1), 27-34, 2008	107	2008
The energy landscape of modular repeat proteins: topology determines folding mechanism in the ankyrin family DU Ferreiro, SS Cho, EA Komives, PG Wolynes Journal of molecular biology 354 (3), 679-692, 2005	102	2005
Fuzziness and frustration in the energy landscape of protein folding, function, and assembly S Gianni, MI Freiberger, P Jemth, DU Ferreiro, PG Wolynes, M Fuxreiter Accounts of chemical research 54 (5), 1251-1259, 2021	77	2021
Stabilizing IκBα by “consensus” design DU Ferreiro, CF Cervantes, SME Truhlar, SS Cho, PG Wolynes, ... Journal of molecular biology 365 (4), 1201-1216, 2007	76	2007
The energy landscapes of repeat-containing proteins: topology, cooperativity, and the folding funnels of one-dimensional architectures DU Ferreiro, AM Walczak, EA Komives, PG Wolynes PLoS computational biology 4 (5), e1000070, 2008	73	2008
Prediction of native-state hydrogen exchange from perfectly funneled energy landscapes PO Craig, J Lätzer, P Weinkam, RMB Hoffman, DU Ferreiro, EA Komives, ... Journal of the American Chemical Society 133 (43), 17463-17472, 2011	69	2011
Frustration, function and folding DU Ferreiro, EA Komives, PG Wolynes Current opinion in structural biology 48, 68-73, 2018	68	2018
A protein–DNA binding mechanism proceeds through multi-state or two-state parallel pathways DU Ferreiro, G de Prat-Gay Journal of molecular biology 331 (1), 89-99, 2003	54	2003
Structural and energetic characterization of the ankyrin repeat protein family RG Parra, R Espada, N Verstraete, DU Ferreiro PLoS computational biology 11 (12), e1004659, 2015	51	2015
Amino acid metabolism conflicts with protein diversity T Krick, N Verstraete, LG Alonso, DA Shub, DU Ferreiro, M Shub, ... Molecular biology and evolution 31 (11), 2905-2912, 2014	45	2014
Distinctive cognate sequence discrimination, bound DNA conformation, and binding modes in the E2 C-terminal domains from prototype human and bovine papillomaviruses DU Ferreiro, LMTR Lima, AD Nadra, LG Alonso, FA Goldbaum, ... Biochemistry 39 (47), 14692-14701, 2000	45	2000
Local frustration around enzyme active sites MI Freiberger, AB Guzovsky, PG Wolynes, RG Parra, DU Ferreiro Proceedings of the National Academy of Sciences 116 (10), 4037-4043, 2019	44	2019

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