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Daniel R. Berger
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Saturated reconstruction of a volume of neocortex
N Kasthuri, KJ Hayworth, DR Berger, RL Schalek, JA Conchello, ...
Cell 162 (3), 648-661, 2015
8382015
Cell diversity and network dynamics in photosensitive human brain organoids
G Quadrato, T Nguyen, EZ Macosko, JL Sherwood, S Min Yang, ...
Nature 545 (7652), 48-53, 2017
7992017
Distinct profiles of myelin distribution along single axons of pyramidal neurons in the neocortex
GS Tomassy, DR Berger, HH Chen, N Kasthuri, KJ Hayworth, A Vercelli, ...
Science 344 (6181), 319-324, 2014
4682014
Crowdsourcing the creation of image segmentation algorithms for connectomics
I Arganda-Carreras, SC Turaga, DR Berger, D Cireşan, A Giusti, ...
Frontiers in neuroanatomy, 142, 2015
3072015
Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits
KJ Hayworth, JL Morgan, R Schalek, DR Berger, DGC Hildebrand, ...
Frontiers in neural circuits 8, 68, 2014
2222014
The fuzzy logic of network connectivity in mouse visual thalamus
JL Morgan, DR Berger, AW Wetzel, JW Lichtman
Cell 165 (1), 192-206, 2016
2122016
A Bayesian model of the disambiguation of gravitoinertial force by visual cues
PR MacNeilage, MS Banks, DR Berger, HH Bülthoff
Experimental Brain Research 179 (2), 263-290, 2007
2112007
Boundary learning by optimization with topological constraints
V Jain, B Bollmann, M Richardson, DR Berger, MN Helmstaedter, ...
2010 IEEE Computer Society Conference on Computer Vision and Pattern …, 2010
1702010
Connectomes across development reveal principles of brain maturation
D Witvliet, B Mulcahy, JK Mitchell, Y Meirovitch, DR Berger, Y Wu, Y Liu, ...
Nature 596 (7871), 257-261, 2021
1282021
Pervasive synaptic branch removal in the mammalian neuromuscular system at birth
JC Tapia, JD Wylie, N Kasthuri, KJ Hayworth, R Schalek, DR Berger, ...
Neuron 74 (5), 816-829, 2012
1222012
VAST (volume annotation and segmentation tool): efficient manual and semi-automatic labeling of large 3D image stacks
DR Berger, HS Seung, JW Lichtman
Frontiers in neural circuits 12, 88, 2018
952018
A connectomic study of a petascale fragment of human cerebral cortex
A Shapson-Coe, M Januszewski, DR Berger, A Pope, Y Wu, T Blakely, ...
BioRxiv, 2021
872021
Simulating believable forward accelerations on a stewart motion platform
DR Berger, J Schulte-Pelkum, HH Bülthoff
ACM Transactions on Applied Perception (TAP) 7 (1), 1-27, 2010
842010
Development of high-throughput, high-resolution 3D reconstruction of large-volume biological tissue using automated tape collection ultramicrotomy and scanning electron microscopy
R Schalek, N Kasthuri, K Hayworth, D Berger, J Tapia, J Morgan, ...
Microscopy and Microanalysis 17 (S2), 966-967, 2011
772011
Nanobody immunostaining for correlated light and electron microscopy with preservation of ultrastructure
T Fang, X Lu, D Berger, C Gmeiner, J Cho, R Schalek, H Ploegh, ...
Nature methods 15 (12), 1029-1032, 2018
632018
Individual oligodendrocytes show bias for inhibitory axons in the neocortex
M Zonouzi, D Berger, V Jokhi, A Kedaigle, J Lichtman, P Arlotta
Cell Reports 27 (10), 2799-2808. e3, 2019
602019
The open connectome project data cluster: scalable analysis and vision for high-throughput neuroscience
R Burns, K Lillaney, DR Berger, L Grosenick, K Deisseroth, RC Reid, ...
Proceedings of the 25th International Conference on Scientific and …, 2013
572013
The role of attention on the integration of visual and inertial cues
DR Berger, HH Bülthoff
Experimental brain research 198 (2), 287-300, 2009
272009
Rhoananet pipeline: Dense automatic neural annotation
S Knowles-Barley, V Kaynig, TR Jones, A Wilson, J Morgan, D Lee, ...
arXiv preprint arXiv:1611.06973, 2016
262016
ATUM-based SEM for high-speed large-volume biological reconstructions
R Schalek, A Wilson, J Lichtman, M Josh, N Kasthuri, D Berger, S Seung, ...
Microscopy and Microanalysis 18 (S2), 572-573, 2012
222012
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