David Vallenet
David Vallenet
CEA - Genoscope - UMR8030 - LABGeM
Verified email at - Homepage
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Cited by
Deciphering the evolution and metabolism of an anammox bacterium from a community genome
M Strous, E Pelletier, S Mangenot, T Rattei, A Lehner, MW Taylor, M Horn, ...
Nature 440 (7085), 790-794, 2006
Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
M Touchon, C Hoede, O Tenaillon, V Barbe, S Baeriswyl, P Bidet, ...
PLoS genetics 5 (1), e1000344, 2009
Comparative Genomics of Multidrug Resistance in Acinetobacter baumannii
PE Fournier, D Vallenet, V Barbe, S Audic, H Ogata, L Poirel, H Richet, ...
PLoS genetics 2 (1), e7, 2006
Legumes Symbioses: Absence of Nod Genes in Photosynthetic Bradyrhizobia
E Giraud, L Moulin, D Vallenet, V Barbe, E Cytryn, JC Avarre, M Jaubert, ...
Science 316 (5829), 1307-1312, 2007
Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium
V Barbe, D Vallenet, N Fonknechten, A Kreimeyer, S Oztas, L Labarre, ...
Nucleic acids research 32 (19), 5766-5779, 2004
MaGe: a microbial genome annotation system supported by synteny results
D Vallenet, L Labarre, Z Rouy, V Barbe, S Bocs, S Cruveiller, A Lajus, ...
Nucleic acids research 34 (1), 53-65, 2006
From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later
V Barbe, S Cruveiller, F Kunst, P Lenoble, G Meurice, A Sekowska, ...
Microbiology 155 (Pt 6), 1758, 2009
Genome sequences of Escherichia coli B strains REL606 and BL21 (DE3)
H Jeong, V Barbe, CH Lee, D Vallenet, DS Yu, SH Choi, A Couloux, ...
Journal of molecular biology 394 (4), 644-652, 2009
Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125
C Médigue, E Krin, G Pascal, V Barbe, A Bernsel, PN Bertin, F Cheung, ...
Genome research 15 (10), 1325-1335, 2005
MicroScope—an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data
D Vallenet, E Belda, A Calteau, S Cruveiller, S Engelen, A Lajus, ...
Nucleic acids research 41 (D1), D636-D647, 2013
Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
P Normand, P Lapierre, LS Tisa, JP Gogarten, N Alloisio, E Bagnarol, ...
Genome research 17 (1), 7-15, 2007
Comparative analysis of Acinetobacters: three genomes for three lifestyles
D Vallenet, P Nordmann, V Barbe, L Poirel, S Mangenot, E Bataille, ...
PloS one 3 (3), e1805, 2008
A complete collection of single‐gene deletion mutants of Acinetobacter baylyi ADP1
V De Berardinis, D Vallenet, V Castelli, M Besnard, A Pinet, C Cruaud, ...
Molecular systems biology 4 (1), 174, 2008
Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila
N Vodovar, D Vallenet, S Cruveiller, Z Rouy, V Barbe, C Acosta, ...
Nature biotechnology 24 (6), 673-679, 2006
MicroScope: a platform for microbial genome annotation and comparative genomics
D Vallenet, S Engelen, D Mornico, S Cruveiller, L Fleury, A Lajus, Z Rouy, ...
Database 2009, 2009
The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis
E Belda, RGA Van Heck, M José Lopez‐Sanchez, S Cruveiller, V Barbe, ...
Environmental microbiology 18 (10), 3403-3424, 2016
Methylobacterium Genome Sequences: A Reference Blueprint to Investigate Microbial Metabolism of C1 Compounds from Natural and Industrial Sources
S Vuilleumier, L Chistoserdova, MC Lee, F Bringel, A Lajus, Y Zhou, ...
PLoS One 4 (5), e5584, 2009
A tale of two oxidation states: bacterial colonization of arsenic-rich environments
D Muller, C Médigue, S Koechler, V Barbe, M Barakat, E Talla, ...
PLoS genetics 3 (4), e53, 2007
Channel Formation by CarO, the Carbapenem Resistance-Associated Outer Membrane Protein of Acinetobacter baumannii
A Siroy, V Molle, C Lemaître-Guillier, D Vallenet, M Pestel-Caron, ...
Antimicrobial agents and chemotherapy 49 (12), 4876-4883, 2005
MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes
D Vallenet, A Calteau, S Cruveiller, M Gachet, A Lajus, A Josso, J Mercier, ...
Nucleic acids research 45 (D1), D517-D528, 2017
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