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tristan cordier
tristan cordier
norce climate & the bjerknes centre for climate research, bergen, norway
Adresse e-mail validée de unige.ch - Page d'accueil
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The future of biotic indices in the ecogenomic era: Integrating (e) DNA metabarcoding in biological assessment of aquatic ecosystems
J Pawlowski, M Kelly-Quinn, F Altermatt, L Apothéloz-Perret-Gentil, P Beja, ...
Science of the Total Environment 637, 1295-1310, 2018
4512018
Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
T Cordier, L Alonso Sáez, L Apotheloz-Perret-Gentil, E Aylagas, ...
Molecular Ecology 30 (13), 2937-2958, 2020
1832020
The composition of phyllosphere fungal assemblages of European beech (Fagus sylvatica) varies significantly along an elevation gradient
T Cordier, C Robin, X Capdevielle, O Fabreguettes, ML Desprez‐Loustau, ...
New Phytologist 196 (2), 510-519, 2012
1822012
Predicting the ecological quality status of marine environments from eDNA metabarcoding data using supervised machine learning
T Cordier, P Esling, F Lejzerowicz, J Visco, A Ouadahi, C Martins, ...
Environmental Science & Technology 51 (16), 9118-9126, 2017
1812017
Spatial variability of phyllosphere fungal assemblages: genetic distance predominates over geographic distance in a European beech stand (Fagus sylvatica)
T Cordier, C Robin, X Capdevielle, ML Desprez-Loustau, C Vacher
Fungal Ecology 5 (5), 509-520, 2012
1572012
Embracing environmental genomics and machine learning for routine biomonitoring
T Cordier, A Lanzén, L Apothéloz-Perret-Gentil, T Stoeck, J Pawlowski
Trends in Microbiology 27 (5), 387-397, 2019
1532019
Supervised machine learning outperforms taxonomy‐based environmental DNA metabarcoding applied to biomonitoring
T Cordier, D Forster, Y Dufresne, CIM Martins, T Stoeck, J Pawlowski
Molecular Ecology Resources 18 (6), 1381–1391, 2018
1402018
Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring
M Sagova-Mareckova, J Boenigk, A Bouchez, K Cermakova, T Chonova, ...
Water research 191, 116767, 2021
1242021
Leaf and root-associated fungal assemblages do not follow similar elevational diversity patterns
A Coince, T Cordier, J Lengellé, E Defossez, C Vacher, C Robin, M Buée, ...
PloS ONE 9 (6), e100668, 2014
1182014
Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
J Pawlowski, K Bruce, K Panksep, FI Aguirre, S Amalfitano, ...
Science of the Total Environment 818, 151783, 2022
902022
Environmental DNA metabarcoding of benthic bacterial communities indicates the benthic footprint of salmon aquaculture
T Stoeck, L Frühe, D Forster, T Cordier, CIM Martins, J Pawlowski
Marine Pollution Bulletin 127, 139-149, 2018
902018
Key questions for next-generation biomonitoring
A Makiola, Z Greg, DJ Baird, A Matthew, S Philip, A Bouchez, G Brennan, ...
Frontiers in Environmental Science, 2019
742019
SLIM: a flexible web application for the reproducible processing of environmental DNA metabarcoding data
Y Dufresne, F Lejzerowicz, LA Perret-Gentil, J Pawlowski, T Cordier
BMC bioinformatics 20 (1), 88, 2019
732019
Supervised machine learning is superior to indicator value inference in monitoring the environmental impacts of salmon aquaculture using eDNA metabarcodes
L Frühe, T Cordier, V Dully, HW Breiner, G Lentendu, J Pawlowski, ...
Molecular Ecology 30 (13), 2988-3006, 2020
682020
Multi-marker eDNA metabarcoding survey to assess the environmental impact of three offshore gas platforms in the North Adriatic Sea (Italy)
T Cordier, F Frontalini, K Cermakova, L Apothéloz-Perret-Gentil, M Treglia, ...
Marine environmental research 146, 24-34, 2019
682019
Benthic monitoring of salmon farms in Norway using foraminiferal metabarcoding
J Pawlowski, P Esling, F Lejzerowicz, T Cordier, JA Visco, CIM Martins, ...
Aquaculture Environment Interactions 8, 371-386, 2016
592016
Benthic foraminiferal metabarcoding and morphology-based assessment around three offshore gas platforms: Congruence and complementarity
F Frontalini, T Cordier, E Balassi, EA du Chatelet, K Cermakova, ...
Environment International 144, 106049, 2020
562020
Monitoring the ecological status of rivers with diatom eDNA metabarcoding: a comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index
L Apothéloz‐Perret‐Gentil, A Bouchez, T Cordier, A Cordonier, ...
Molecular Ecology 30 (13), 2959-2968, 2020
562020
Environmental DNA for biomonitoring
J Pawlowski, A Bonin, F Boyer, T Cordier, P Taberlet
Molecular ecology 30 (13), 2931-2936, 2021
532021
Patterns of eukaryotic diversity from the surface to the deep-ocean sediment
T Cordier, I Barrenechea Angeles, N Henry, F Lejzerowicz, C Berney, ...
Science Advances 8 (5), eabj9309, 2022
472022
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