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Marie-Dominique Devignes
Marie-Dominique Devignes
CNRS, LORIA UMR7503
Geverifieerd e-mailadres voor loria.fr - Homepage
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HexServer: an FFT-based protein docking server powered by graphics processors
G Macindoe, L Mavridis, V Venkatraman, MD Devignes, DW Ritchie
Nucleic acids research 38 (suppl_2), W445-W449, 2010
7282010
Integrative annotation of 21,037 human genes validated by full-length cDNA clones
T Imanishi, T Itoh, Y Suzuki, C O'donovan, S Fukuchi, KO Koyanagi, ...
PLoS biology 2 (6), e162, 2004
4272004
Application of artificial intelligence to gastroenterology and hepatology
C Le Berre, WJ Sandborn, S Aridhi, MD Devignes, L Fournier, ...
Gastroenterology 158 (1), 76-94. e2, 2020
4012020
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
N Zhou, Y Jiang, TR Bergquist, AJ Lee, BZ Kacsoh, AW Crocker, ...
Genome biology 20, 1-23, 2019
3522019
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment
MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ...
Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016
1662016
Protein docking using case‐based reasoning
AW Ghoorah, MD Devignes, M Smaïl‐Tabbone, DW Ritchie
Proteins: Structure, Function, and Bioinformatics 81 (12), 2150-2158, 2013
1282013
IntelliGO: a new vector-based semantic similarity measure including annotation origin
S Benabderrahmane, M Smail-Tabbone, O Poch, A Napoli, MD Devignes
BMC bioinformatics 11, 1-16, 2010
1282010
Blind prediction of homo‐and hetero‐protein complexes: The CASP13‐CAPRI experiment
MF Lensink, G Brysbaert, N Nadzirin, S Velankar, RAG Chaleil, T Gerguri, ...
Proteins: Structure, Function, and Bioinformatics 87 (12), 1200-1221, 2019
1172019
The Genexpress IMAGE knowledge base of the human brain transcriptome: a prototype integrated resource for functional and computational genomics
G Piétu, R Mariage-Samson, NA Fayein, C Matingou, E Eveno, ...
Genome research 9 (2), 195-209, 1999
1141999
IMAGE: molecular integration of the analysis of the human genome and its expression
C Auffray, G Behar, F Bois, C Bouchier, C Da Silva, MD Devignes, ...
Comptes Rendus de L'academie des sciences. Serie III, Sciences de la vie 318 …, 1995
751995
New insights into the classification and integration specificity of Streptococcus integrative conjugative elements through extensive genome exploration
C Ambroset, C Coluzzi, G Guédon, MD Devignes, V Loux, T Lacroix, ...
Frontiers in microbiology 6, 162477, 2016
712016
Activation of Peroxisome Proliferator-Activated Receptor Gamma by Human Cytomegalovirus for De Novo Replication Impairs Migration and Invasiveness of …
B Rauwel, B Mariamé, H Martin, R Nielsen, S Allart, B Pipy, S Mandrup, ...
Journal of virology 84 (6), 2946-2954, 2010
712010
Many-Valued Concept Lattices for Conceptual Clustering and Information Retrieval.
N Messai, MD Devignes, A Napoli, M Smail-Tabbone
ECAI 178, 127-131, 2008
692008
Report of the fifth international workshop on human chromosome 11 mapping 1996
TB Shows, M Alders, S Bennett, D Burbee, P Cartwright, ...
Cytogenetics and cell genetics 74 (1-2), 1-56, 1996
611996
Querying a bioinformatic data sources registry with concept lattices
N Messai, MD Devignes, A Napoli, M Smail-Tabbone
International Conference on Conceptual Structures, 323-336, 2005
582005
Integrative relational machine-learning for understanding drug side-effect profiles
E Bresso, R Grisoni, G Marchetti, AS Karaboga, M Souchet, MD Devignes, ...
BMC bioinformatics 14, 1-11, 2013
572013
Head-to-head comparison of clustering methods for heterogeneous data: a simulation-driven benchmark
G Preud’Homme, K Duarte, K Dalleau, C Lacomblez, E Bresso, ...
Scientific reports 11 (1), 4202, 2021
522021
Machine learning-derived echocardiographic phenotypes predict heart failure incidence in asymptomatic individuals
M Kobayashi, O Huttin, M Magnusson, JP Ferreira, E Bozec, AC Huby, ...
Cardiovascular Imaging 15 (2), 193-208, 2022
482022
Spatial clustering of protein binding sites for template based protein docking
AW Ghoorah, MD Devignes, M Smaïl-Tabbone, DW Ritchie
Bioinformatics 27 (20), 2820-2827, 2011
432011
Extended spectrum of MBD5 mutations in neurodevelopmental disorders
C Bonnet, A Ali Khan, E Bresso, C Vigouroux, M Béri, S Lejczak, ...
European Journal of Human Genetics 21 (12), 1457-1461, 2013
392013
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Artikelen 1–20