Pasi Rastas
Pasi Rastas
Research Associate, University of Helsinki, Institute of Biotechnology
Geverifieerd e-mailadres voor helsinki.fi - Homepage
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DNA-binding specificities of human transcription factors
A Jolma, J Yan, T Whitington, J Toivonen, KR Nitta, P Rastas, ...
Cell 152 (1-2), 327-339, 2013
9272013
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
V Ahola, R Lehtonen, P Somervuo, L Salmela, P Koskinen, P Rastas, ...
Nature communications 5 (1), 1-9, 2014
1632014
Complex modular architecture around a simple toolkit of wing pattern genes
SM Van Belleghem, P Rastas, A Papanicolaou, SH Martin, CF Arias, ...
Nature Ecology & Evolution 1 (3), 1-12, 2017
1202017
MOODS: fast search for position weight matrix matches in DNA sequences
J Korhonen, P Martinmäki, C Pizzi, P Rastas, E Ukkonen
Bioinformatics 25 (23), 3181-3182, 2009
1142009
Lep-MAP: fast and accurate linkage map construction for large SNP datasets
P Rastas, L Paulin, I Hanski, R Lehtonen, P Auvinen
Bioinformatics 29 (24), 3128-3134, 2013
1112013
Construction of Ultradense Linkage Maps with Lep-MAP2: Stickleback F 2 Recombinant Crosses as an Example
P Rastas, FCF Calboli, B Guo, T Shikano, J Merilä
Genome biology and evolution 8 (1), 78-93, 2016
1082016
Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch
J Salojärvi, OP Smolander, K Nieminen, S Rajaraman, O Safronov, ...
Nature genetics 49 (6), 904-912, 2017
1052017
Genome-wide SNP identification for the construction of a high-resolution genetic map of Japanese flounder (Paralichthys olivaceus): applications to QTL mapping of Vibrio …
C Shao, Y Niu, P Rastas, Y Liu, Z Xie, H Li, L Wang, Y Jiang, S Tai, Y Tian, ...
DNA research 22 (2), 161-170, 2015
902015
Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing data
P Rastas
Bioinformatics 33 (23), 3726-3732, 2017
882017
Whole-genome sequencing coupled to imputation discovers genetic signals for anthropometric traits
I Tachmazidou, D Süveges, JL Min, GRS Ritchie, J Steinberg, K Walter, ...
The American Journal of Human Genetics 100 (6), 865-884, 2017
622017
High genetic load in an old isolated butterfly population
ALK Mattila, A Duplouy, M Kirjokangas, R Lehtonen, P Rastas, I Hanski
Proceedings of the National Academy of Sciences 109 (37), E2496-E2505, 2012
582012
Blastocystis subtyping and its association with intestinal parasites in children from different geographical regions of Colombia
JD Ramírez, C Flórez, M Olivera, MC Bernal, JC Giraldo
PloS one 12 (2), e0172586, 2017
532017
Genetic dissection of assortative mating behavior
RM Merrill, P Rastas, SH Martin, MC Melo, S Barker, J Davey, ...
PLoS biology 17 (2), e2005902, 2019
452019
No evidence for maintenance of a sympatric Heliconius species barrier by chromosomal inversions
JW Davey, SL Barker, PM Rastas, A Pinharanda, SH Martin, R Durbin, ...
Evolution Letters 1 (3), 138-154, 2017
442017
A hidden Markov technique for haplotype reconstruction
P Rastas, M Koivisto, H Mannila, E Ukkonen
International Workshop on Algorithms in Bioinformatics, 140-151, 2005
402005
Evolution at two time frames: Polymorphisms from an ancient singular divergence event fuel contemporary parallel evolution
SM Van Belleghem, C Vangestel, K De Wolf, Z De Corte, M Möst, ...
PLoS Genetics 14 (11), e1007796, 2018
362018
Flight‐induced changes in gene expression in the Glanville fritillary butterfly
J Kvist, ALK Mattila, P Somervuo, V Ahola, P Koskinen, L Paulin, ...
Molecular Ecology 24 (19), 4886-4900, 2015
322015
Finding significant matches of position weight matrices in linear time
C Pizzi, P Rastas, E Ukkonen
IEEE/ACM transactions on computational biology and bioinformatics 8 (1), 69-79, 2009
282009
A genome-wide association study for host resistance to ostreid herpesvirus in pacific oysters (Crassostrea gigas)
AP Gutierrez, TP Bean, C Hooper, CA Stenton, MB Sanders, RK Paley, ...
G3: Genes, Genomes, Genetics 8 (4), 1273-1280, 2018
242018
Haplotype inference via hierarchical genotype parsing
P Rastas, E Ukkonen
International Workshop on Algorithms in Bioinformatics, 85-97, 2007
232007
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Artikelen 1–20