| The Salmonella enterica Pan-genome A Jacobsen, RS Hendriksen, FM Aaresturp, DW Ussery, C Friis Microbial ecology 62 (3), 487, 2011 | 189 | 2011 |
| Recommendations for improving the quality of rare disease registries Y Kodra, J Weinbach, M Posada-De-La-Paz, A Coi, SL Lemonnier, ... International Journal of Environmental Research and Public Health 15 (8), 1644, 2018 | 39 | 2018 |
| FAIR Principles: interpretations and implementation considerations A Jacobsen, R de Miranda Azevedo, N Juty, D Batista, S Coles, R Cornet, ... Data Intelligence 2 (1-2), 10-29, 2020 | 33 | 2020 |
| Aurora kinase A (AURKA) interaction with Wnt and Ras-MAPK signalling pathways in colorectal cancer A Jacobsen, LJW Bosch, SR Martens-de Kemp, B Carvalho, ... Scientific reports 8 (1), 1-11, 2018 | 18 | 2018 |
| MECP2 variation in Rett syndrome—An overview of current coverage of genetic and phenotype data within existing databases GS Townend, F Ehrhart, HJ van Kranen, M Wilkinson, A Jacobsen, ... Human mutation 39 (7), 914-924, 2018 | 14 | 2018 |
| Construction and Experimental Validation of a Petri net Model of Wnt/β-catenin Signaling A Jacobsen, N Heijmans, F Verkaar, MJ Smit, J Heringa, ... PLoS One 11 (5), e0155743, 2016 | 14 | 2016 |
| Highlights from the tenth ISCB Student Council Symposium 2014 F Rahman, K Wilkins, A Jacobsen, A Junge, E Vicedo, D Deblasio, ... BMC Bioinformatics 16, doi:10.1186/1471-2105-16-S2-A1, 2015 | 14* | 2015 |
| FAIR convergence matrix: Optimizing the reuse of existing FAIR-related resources HP Sustkova, KM Hettne, P Wittenburg, A Jacobsen, T Kuhn, R Pergl, ... Data Intelligence 2 (1-2), 158-170, 2020 | 13 | 2020 |
| A generic workflow for the data FAIRification process A Jacobsen, R Kaliyaperumal, LOB da Silva Santos, B Mons, E Schultes, ... Data Intelligence 2 (1-2), 56-65, 2020 | 13 | 2020 |
| BioASF: a framework for automatically generating executable pathway models specified in BioPAX R Haydarlou, A Jacobsen, N Bonzanni, KA Feenstra, S Abeln, J Heringa Bioinformatics 32 (12), i60-i69, 2016 | 13 | 2016 |
| The FAIR Principles: First Generation Implementation Choices and Challenges B Mons, E Schultes, F Liu, A Jacobsen Data Intelligence 2 (1-2), 1-9, 2020 | 8 | 2020 |
| The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data P Wittenburg, HP Sustkova, A Montesanti, SM Bloemers, SH de Waard, ... arXiv preprint arXiv:1902.11162, 2019 | 6 | 2019 |
| Highlights from the ISCB student council symposia in 2016 B Cuypers, A Jacobsen, B Siranosian, K Schwahn, AM Conard, N Aben, ... F1000Research 5, 2016 | 5 | 2016 |
| The ability of transcription factors to differentially regulate gene expression is a crucial component of the mechanism underlying inversion, a frequently observed genetic … S Amini, A Jacobsen, O Ivanova, P Lijnzaad, J Heringa, FCP Holstege, ... PLoS computational biology 15 (5), e1007061, 2019 | 3 | 2019 |
| A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration F Ehrhart, A Jacobsen, M Rigau, M Bosio, R Kaliyaperumal, JFJ Laros, ... Scientific data 8 (1), 1-12, 2021 | | 2021 |
| De-novo FAIRification via an Electronic Data Capture system by automated transformation of filled electronic Case Report Forms into machine-readable data MG Kersloot, A Jacobsen, KHJ Groenen, B dos Santos Vieira, ... medRxiv, 2021 | | 2021 |
| 863 different causes of Rett syndrome and lessons learned from data integration. F Ehrhart, A Jacobsen, M Rigau, M Bosio, R Kaliyaperumal, J Laros, ... Authorea Preprints, 2020 | | 2020 |
| A framework for exhaustive modelling of genetic interaction patterns using Petri nets A Jacobsen, O Ivanova, S Amini, J Heringa, P Kemmeren, KA Feenstra Bioinformatics 36 (7), 2142-2149, 2020 | | 2020 |
| The de novo FAIRification process of a registry for vascular anomalies KHJ Groenen, A Jacobsen, MG Kersloot, B Vieira, E van Enckevort, ... medRxiv, 2020 | | 2020 |
| Reasoning about cell dynamics using network models A Jacobsen | | 2019 |
