A deep learning framework for unsupervised affine and deformable image registration BD De Vos, FF Berendsen, MA Viergever, H Sokooti, M Staring, I Išgum Medical image analysis 52, 128-143, 2019 | 526 | 2019 |
End-to-end unsupervised deformable image registration with a convolutional neural network BD De Vos, FF Berendsen, MA Viergever, M Staring, I Išgum Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical …, 2017 | 441 | 2017 |
Nonrigid image registration using multi-scale 3D convolutional neural networks H Sokooti, B De Vos, F Berendsen, BPF Lelieveldt, I Išgum, M Staring Medical Image Computing and Computer Assisted Intervention− MICCAI 2017 …, 2017 | 334 | 2017 |
SimpleElastix: A user-friendly, multi-lingual library for medical image registration K Marstal, F Berendsen, M Staring, S Klein Proceedings of the IEEE Conference on Computer Vision and Pattern …, 2016 | 243 | 2016 |
Multiatlas‐based segmentation with preregistration atlas selection TR Langerak, FF Berendsen, UA Van der Heide, ANTJ Kotte, JPW Pluim Medical physics 40 (9), 091701, 2013 | 77 | 2013 |
Fully automatic segmentation of left atrium and pulmonary veins in late gadolinium‐enhanced MRI: Towards objective atrial scar assessment Q Tao, EG Ipek, R Shahzad, FF Berendsen, S Nazarian, RJ van der Geest Journal of magnetic resonance imaging 44 (2), 346-354, 2016 | 47 | 2016 |
Medical Image Computing and Computer Assisted Intervention− MICCAI 2017 H Sokooti, B de Vos, F Berendsen, BPF Lelieveldt, I Išgum, M Staring Cham: Springer, 232-239, 2017 | 45 | 2017 |
Free-form image registration regularized by a statistical shape model: application to organ segmentation in cervical MR FF Berendsen, UA van der Heide, TR Langerak, ANTJ Kotte, JPW Pluim Computer Vision and Image Understanding 117 (9), 1119-1127, 2013 | 36 | 2013 |
Registration of organs with sliding interfaces and changing topologies FF Berendsen, ANTJ Kotte, MA Viergever, JPW Pluim Medical Imaging 2014: Image Processing 9034, 95-101, 2014 | 30 | 2014 |
3D convolutional neural networks image registration based on efficient supervised learning from artificial deformations H Sokooti, B de Vos, F Berendsen, M Ghafoorian, S Yousefi, ... arXiv preprint arXiv:1908.10235, 2019 | 27 | 2019 |
Registration of structurally dissimilar images in MRI-based brachytherapy FF Berendsen, A Kotte, AAC de Leeuw, IM Jürgenliemk-Schulz, ... Physics in Medicine & Biology 59 (15), 4033, 2014 | 18 | 2014 |
Robust motion correction for myocardial T1 and extracellular volume mapping by principle component analysis‐based groupwise image registration Q Tao, P van der Tol, FF Berendsen, EHM Paiman, HJ Lamb, ... Journal of Magnetic Resonance Imaging 47 (5), 1397-1405, 2018 | 17 | 2018 |
The continuous registration challenge: evaluation-as-a-service for medical image registration algorithms K Marstal, F Berendsen, N Dekker, M Staring, S Klein 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019 …, 2019 | 11 | 2019 |
Evaluating and improving label fusion in atlas-based segmentation using the surface distance TR Langerak, UA van der Heide, ANTJ Kotte, FF Berendsen, JPW Pluim Medical Imaging 2011: Image Processing 7962, 688-694, 2011 | 9 | 2011 |
Improving label fusion in multi-atlas based segmentation by locally combining atlas selection and performance estimation TR Langerak, UA van der Heide, ANTJ Kotte, FF Berendsen, JPW Pluim Computer Vision and Image Understanding 130, 71-79, 2015 | 8 | 2015 |
Fully automated segmentation of the left atrium, pulmonary veins, and left atrial appendage from magnetic resonance angiography by joint‐atlas‐optimization M Qiao, Y Wang, FF Berendsen, RJ van der Geest, Q Tao Medical physics 46 (5), 2074-2084, 2019 | 7 | 2019 |
Local atlas selection and performance estimation in multi-atlas based segmentation TR Langerak, UA van der Heide, ANTJ Kotte, FF Berendsen, JPW Pluim 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2011 | 7 | 2011 |
GPU-based stochastic-gradient optimization for non-rigid medical image registration in time-critical applications P Bhosale, M Staring, Z Al-Ars, FF Berendsen Medical Imaging 2018: Image Processing 10574, 185-191, 2018 | 4 | 2018 |
Fully automated segmentation of left atrium and pulmonary veins in late gadolinium enhanced MRI Q Tao, R Shahzad, EG Ipek, FF Berendsen, S Nazarian, RJ van der Geest Journal of Cardiovascular Magnetic Resonance 18 (1), 1-3, 2016 | 4 | 2016 |
The Design of SuperElastix--A Unifying Framework for a Wide Range of Image Registration Methodologies FF Berendsen, K Marstal, S Klein, M Staring Proceedings of the IEEE Conference on Computer Vision and Pattern …, 2016 | 4 | 2016 |