Eva Maria Novoa
Cited by
Cited by
Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes
DE Neafsey, RM Waterhouse, MR Abai, SS Aganezov, MA Alekseyev, ...
Science 347 (6217), 1258522, 2015
The RNA modification landscape in human disease
N Jonkhout, J Tran, MA Smith, N Schonrock, JS Mattick, EM Novoa
RNA, 2017
Speeding with control: codon usage, tRNAs, and ribosomes
EM Novoa, LR de Pouplana
Trends in Genetics 28 (11), 574-581, 2012
Accurate detection of m6A RNA modifications in native RNA sequences
H Liu, O Begik, MC Lucas, JM Ramirez, CE Mason, D Wiener, S Schwartz, ...
Nature communications 10 (1), 4079, 2019
A role for tRNA modifications in genome structure and codon usage
EM Novoa, M Pavon-Eternod, T Pan, LR de Pouplana
Cell 149 (1), 202-213, 2012
Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing
O Begik, MC Lucas, LP Pryszcz, JM Ramirez, R Medina, I Milenkovic, ...
Nature biotechnology 39 (10), 1278-1291, 2021
Analyses of mRNA structure dynamics identify embryonic gene regulatory programs
JD Beaudoin, EM Novoa, CE Vejnar, V Yartseva, CM Takacs, M Kellis, ...
Nature structural & molecular biology 25 (8), 677-686, 2018
Ensemble docking from homology models
EM Novoa, LR Pouplana, X Barril, M Orozco
Journal of Chemical Theory and Computation 6 (8), 2547-2557, 2010
Analogs of natural aminoacyl-tRNA synthetase inhibitors clear malaria in vivo
EM Novoa, N Camacho, A Tor, B Wilkinson, S Moss, P Marín-García, ...
Proceedings of the National Academy of Sciences 111 (51), E5508-E5517, 2014
High-throughput 5′ UTR engineering for enhanced protein production in non-viral gene therapies
J Cao, EM Novoa, Z Zhang, WCW Chen, D Liu, GCG Choi, ASL Wong, ...
Nature communications 12 (1), 4138, 2021
Computational methods for RNA modification detection from nanopore direct RNA sequencing data
M Furlan, A Delgado-Tejedor, L Mulroney, M Pelizzola, EM Novoa, ...
RNA biology 18 (sup1), 31-40, 2021
Integrative analyses of the RNA modification machinery reveal tissue-and cancer-specific signatures
O Begik, MC Lucas, H Liu, JM Ramirez, JS Mattick, EM Novoa
Genome biology 21, 1-24, 2020
Elucidation of codon usage signatures across the domains of life
EM Novoa, I Jungreis, O Jaillon, M Kellis
Molecular Biology and Evolution 36 (10), 2328-2339, 2019
Saturation of recognition elements blocks evolution of new tRNA identities
A Saint-Léger, C Bello, PD Dans, AG Torres, EM Novoa, N Camacho, ...
Science advances 2 (4), e1501860, 2016
A high-throughput screening and computation platform for identifying synthetic promoters with enhanced cell-state specificity (SPECS)
MR Wu, L Nissim, D Stupp, E Pery, A Binder-Nissim, K Weisinger, ...
Nature communications 10 (1), 2880, 2019
Charting the unknown epitranscriptome
EM Novoa, CE Mason, JS Mattick
Nature Reviews Molecular Cell Biology 18 (6), 339-340, 2017
Quantitative analysis of tRNA abundance and modifications by nanopore RNA sequencing
MC Lucas, LP Pryszcz, R Medina, I Milenkovic, N Camacho, V Marchand, ...
Nature Biotechnology 42 (1), 72-86, 2024
Molecular barcoding of native RNAs using nanopore sequencing and deep learning
MA Smith, T Ersavas, JM Ferguson, H Liu, MC Lucas, O Begik, L Bojarski, ...
Genome research 30 (9), 1345-1353, 2020
MasterOfPores: a workflow for the analysis of oxford nanopore direct RNA sequencing datasets
L Cozzuto, H Liu, LP Pryszcz, TH Pulido, A Delgado-Tejedor, ...
Frontiers in Genetics 11, 211, 2020
EpiNano: Detection of m6A RNA Modifications Using Oxford Nanopore Direct RNA Sequencing
H Liu, O Begik, EM Novoa
RNA Modifications: Methods and Protocols, 31-52, 2021
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