Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis JJ Benschop, S Mohammed, M O'Flaherty, AJR Heck, M Slijper, ... Molecular & Cellular Proteomics 6 (7), 1198-1214, 2007 | 800 | 2007 |
Large-scale genetic perturbations reveal regulatory networks and an abundance of gene-specific repressors P Kemmeren, K Sameith, LAL Van De Pasch, JJ Benschop, TL Lenstra, ... Cell 157 (3), 740-752, 2014 | 331 | 2014 |
The specificity and topology of chromatin interaction pathways in yeast TL Lenstra, JJ Benschop, TS Kim, JM Schulze, NACH Brabers, ... Molecular cell 42 (4), 536-549, 2011 | 262 | 2011 |
Interactions Between Plant Hormones Regulate Submergence‐induced Shoot Elongation in the Flooding‐tolerant Dicot Rumex palustris L Voesenek, JJ Benschop, J Bou, MCH Cox, HW Groeneveld, ... Annals of Botany 91 (2), 205-211, 2003 | 241 | 2003 |
Ethylene regulates fast apoplastic acidification and expansin A transcription during submergence‐induced petiole elongation in Rumex palustris RAM Vreeburg, JJ Benschop, AJM Peeters, TD Colmer, AHM Ammerlaan, ... The Plant Journal 43 (4), 597-610, 2005 | 174 | 2005 |
From structure to systems: high-resolution, quantitative genetic analysis of RNA polymerase II H Braberg, H Jin, EA Moehle, YA Chan, S Wang, M Shales, JJ Benschop, ... Cell 154 (4), 775-788, 2013 | 164 | 2013 |
Contrasting interactions between ethylene and abscisic acid in Rumex species differing in submergence tolerance JJ Benschop, MB Jackson, K Gühl, RAM Vreeburg, SJ Croker, ... The Plant Journal 44 (5), 756-768, 2005 | 162 | 2005 |
The Roles of Ethylene, Auxin, Abscisic Acid, and Gibberellin in the Hyponastic Growth of Submerged Rumex palustris Petioles MCH Cox, JJ Benschop, RAM Vreeburg, CAM Wagemaker, T Moritz, ... Plant Physiology 136 (2), 2948-2960, 2004 | 158 | 2004 |
Functional overlap and regulatory links shape genetic interactions between signaling pathways S van Wageningen, P Kemmeren, P Lijnzaad, T Margaritis, JJ Benschop, ... Cell 143 (6), 991-1004, 2010 | 151 | 2010 |
Two distinct repressive mechanisms for histone 3 lysine 4 methylation through promoting 3′-end antisense transcription T Margaritis, V Oreal, N Brabers, L Maestroni, A Vitaliano-Prunier, ... Public Library of Science 8 (9), e1002952, 2012 | 144 | 2012 |
The role of the alternative oxidase in stabilizing the in vivo reduction state of the ubiquinone pool and the activation state of the alternative oxidase FF Millenaar, JJ Benschop, AM Wagner, H Lambers Plant Physiology 118 (2), 599-607, 1998 | 133 | 1998 |
Cell cycle population effects in perturbation studies E O'Duibhir, P Lijnzaad, JJ Benschop, TL Lenstra, D van Leenen, ... Molecular systems biology 10 (6), 732, 2014 | 115 | 2014 |
Submergence research using Rumex palustris as a model; looking back and going forward AJM Peeters, MCH Cox, JJ Benschop, RAM Vreeburg, J Bou, ... Journal of Experimental Botany 53 (368), 391-398, 2002 | 105 | 2002 |
Distinct role of Mediator tail module in regulation of SAGA‐dependent, TATA‐containing genes in yeast SA Ansari, M Ganapathi, JJ Benschop, FCP Holstege, JT Wade, ... The EMBO Journal 31 (1), 44-57, 2012 | 92 | 2012 |
A consensus of core protein complex compositions for Saccharomyces cerevisiae JJ Benschop, N Brabers, D van Leenen, LV Bakker, HWM van Deutekom, ... Molecular cell 38 (6), 916-928, 2010 | 91 | 2010 |
Long-Term Submergence-Induced Elongation in Rumex palustris Requires Abscisic Acid-Dependent Biosynthesis of Gibberellin1 JJ Benschop, J Bou, AJM Peeters, N Wagemaker, K Guhl, D Ward, ... Plant Physiology 141 (4), 1644-1652, 2006 | 91 | 2006 |
Abscisic acid antagonizes ethylene-induced hyponastic growth in Arabidopsis JJ Benschop, FF Millenaar, ME Smeets, M van Zanten, LACJ Voesenek, ... Plant Physiology 143 (2), 1013-1023, 2007 | 83 | 2007 |
Chip-based enrichment and NanoLC− MS/MS analysis of phosphopeptides from whole lysates S Mohammed, K Kraiczek, MWH Pinkse, S Lemeer, JJ Benschop, ... Journal of proteome research 7 (4), 1565-1571, 2008 | 78 | 2008 |
Epistatic relationships reveal the functional organization of yeast transcription factors J Zheng, JJ Benschop, M Shales, P Kemmeren, J Greenblatt, G Cagney, ... Molecular systems biology 6 (1), 420, 2010 | 73 | 2010 |
Suppression of Mediator is regulated by Cdk8-dependent Grr1 turnover of the Med3 coactivator D Gonzalez, N Hamidi, R Del Sol, JJ Benschop, T Nancy, C Li, L Francis, ... Proceedings of the National Academy of Sciences 111 (7), 2500-2505, 2014 | 56 | 2014 |