| Rethinking drug design in the artificial intelligence era P Schneider, WP Walters, AT Plowright, N Sieroka, J Listgarten, ... Nature reviews drug discovery 19 (5), 353-364, 2020 | 702 | 2020 |
| Executable cell biology J Fisher, TA Henzinger Nature biotechnology 25 (11), 1239-1249, 2007 | 694 | 2007 |
| Decoding the regulatory network of early blood development from single-cell gene expression measurements V Moignard, S Woodhouse, L Haghverdi, AJ Lilly, Y Tanaka, ... Nature biotechnology 33 (3), 269-276, 2015 | 455 | 2015 |
| Vaccination for neuroprotection in the mouse optic nerve: implications for optic neuropathies J Fisher, H Levkovitch-Verbin, H Schori, E Yoles, O Butovsky, JF Kaye, ... Journal of Neuroscience 21 (1), 136-142, 2001 | 221 | 2001 |
| Protective autoimmunity against the enemy within: fighting glutamate toxicity M Schwartz, I Shaked, J Fisher, T Mizrahi, H Schori Trends in Neurosciences 26 (6), 297-302, 2003 | 183 | 2003 |
| Visible machine learning for biomedicine KY Michael, J Ma, J Fisher, JF Kreisberg, BJ Raphael, T Ideker Cell 173 (7), 1562-1565, 2018 | 167 | 2018 |
| Computational insights into Caenorhabditis elegans vulval development J Fisher, N Piterman, EJA Hubbard, MJ Stern, D Harel Proceedings of the National Academy of Sciences 102 (6), 1951-1956, 2005 | 127 | 2005 |
| Qualitative networks: a symbolic approach to analyze biological signaling networks MA Schaub, TA Henzinger, J Fisher BMC systems biology 1, 1-21, 2007 | 124 | 2007 |
| Predictive modeling of signaling crosstalk during C. elegans vulval development J Fisher, N Piterman, A Hajnal, TA Henzinger PLoS computational biology 3 (5), e92, 2007 | 121 | 2007 |
| BTR: training asynchronous Boolean models using single-cell expression data CY Lim, H Wang, S Woodhouse, N Piterman, L Wernisch, J Fisher, ... BMC bioinformatics 17, 1-18, 2016 | 105 | 2016 |
| Toward verified biological models A Sadot, J Fisher, D Barak, Y Admanit, MJ Stern, EJA Hubbard, D Harel IEEE/ACM transactions on computational biology and bioinformatics 5 (2), 223-234, 2008 | 101 | 2008 |
| Neuroprotection by T-cells depends on their subtype and activation state SA Wolf, J Fisher, I Bechmann, B Steiner, E Kwidzinski, R Nitsch Journal of neuroimmunology 133 (1-2), 72-80, 2002 | 99 | 2002 |
| SCNS: a graphical tool for reconstructing executable regulatory networks from single-cell genomic data S Woodhouse, N Piterman, CM Wintersteiger, B Göttgens, J Fisher BMC systems biology 12, 1-7, 2018 | 96 | 2018 |
| Biology as reactivity J Fisher, D Harel, TA Henzinger Communications of the ACM 54 (10), 72-82, 2011 | 70 | 2011 |
| Increased post-traumatic survival of neurons in IL-6-knockout mice on a background of EAE susceptibility J Fisher, T Mizrahi, H Schori, E Yoles, H Levkovitch-Verbin, S Haggiag, ... Journal of neuroimmunology 119 (1), 1-9, 2001 | 70 | 2001 |
| Bma: Visual Tool for Modeling and Analyzing Biological Networks D Benque, S Bourton, C Cockerton, B Cook, J Fisher, S Ishtiaq, ... Computer Aided Verification: 24th International Conference, CAV 2012 …, 2012 | 63 | 2012 |
| Cellular resolution models for even skipped regulation in the entire Drosophila embryo GR Ilsley, J Fisher, R Apweiler, AH DePace, NM Luscombe Elife 2, e00522, 2013 | 59 | 2013 |
| Executable cancer models: successes and challenges MA Clarke, J Fisher Nature Reviews Cancer 20 (6), 343-354, 2020 | 56 | 2020 |
| Proving stabilization of biological systems B Cook, J Fisher, E Krepska, N Piterman Verification, Model Checking, and Abstract Interpretation: 12th …, 2011 | 56 | 2011 |
| Cell‐cycle regulation of NOTCH signaling during C. elegans vulval development S Nusser‐Stein, A Beyer, I Rimann, M Adamczyk, N Piterman, A Hajnal, ... Molecular systems biology 8 (1), 618, 2012 | 53 | 2012 |
Nir PitermanProfessor in Computer Science, University of Gothenburg, SwedenVerified email at gu.se
