| SynGO: an evidence-based, expert-curated knowledge base for the synapse F Koopmans, P van Nierop, M Andres-Alonso, A Byrnes, T Cijsouw, ... Neuron 103 (2), 217-234. e4, 2019 | 554 | 2019 |
| Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ... Nature biotechnology 36 (12), 1197-1202, 2018 | 276 | 2018 |
| A spatially resolved brain region-and cell type-specific isoform atlas of the postnatal mouse brain A Joglekar, A Prjibelski, A Mahfouz, P Collier, S Lin, AK Schlusche, ... Nature Communications 12 (1), 463, 2021 | 137 | 2021 |
| Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue SA Hardwick*, W Hu*, A Joglekar*, L Fan, PG Collier, C Foord, J Balacco, ... Nature Biotechnology, 1-11, 2022 | 60 | 2022 |
| Getting the entire message: progress in isoform sequencing SA Hardwick, A Joglekar, P Flicek, A Frankish, HU Tilgner Frontiers in genetics 10, 709, 2019 | 45 | 2019 |
| Accurate isoform discovery with IsoQuant using long reads AD Prjibelski, A Mikheenko, A Joglekar, A Smetanin, J Jarroux, ... Nature Biotechnology 41 (7), 915-918, 2023 | 41 | 2023 |
| Neuroprotective role of gap junctions in a neuron astrocyte network model G Huguet, A Joglekar, LM Messi, R Buckalew, S Wong, D Terman Biophysical journal 111 (2), 452-462, 2016 | 38 | 2016 |
| Sequencing of individual barcoded cDNAs using Pacific Biosciences and Oxford Nanopore Technologies reveals platform-specific error patterns A Mikheenko, AD Prjibelski, A Joglekar, HU Tilgner Genome Research 32 (4), 726-737, 2022 | 17 | 2022 |
| ScisorWiz: visualizing differential isoform expression in single-cell long-read data AN Stein, A Joglekar, CL Poon, HU Tilgner Bioinformatics 38 (13), 3474-3476, 2022 | 13 | 2022 |
| The variables on RNA molecules: concert or cacophony? Answers in long-read sequencing C Foord, J Hsu, J Jarroux, W Hu, N Belchikov, S Pollard, Y He, A Joglekar, ... nature methods 20 (1), 20-24, 2023 | 12 | 2023 |
| From words to complete phrases: insight into single-cell isoforms using short and long reads A Joglekar, C Foord, J Jarroux, S Pollard, HU Tilgner Transcription 14 (3-5), 92-104, 2023 | 6 | 2023 |
| Single-cell long-read mRNA isoform regulation is pervasive across mammalian brain regions, cell types, and development A Joglekar, W Hu, B Zhang, O Narykov, M Diekhans, J Balacco, ... bioRxiv, 2023 | 6 | 2023 |
| Comparing 10x Genomics single-cell 3’and 5’assay in short-and long-read sequencing J Hsu, J Jarroux, A Joglekar, JP Romero, C Nemec, D Reyes, A Royall, ... bioRxiv, 2022.10. 27.514084, 2022 | 4 | 2022 |
| Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain A Joglekar, W Hu, B Zhang, O Narykov, M Diekhans, J Marrocco, ... Nature Neuroscience, 1-13, 2024 | | 2024 |
| Predicting cell-type-specific exon inclusion in the human brain reveals more complex splicing mechanisms in neurons than glia L Michielsen, J Hsu, A Joglekar, N Belchikov, M Reinders, H Tilgner, ... bioRxiv, 2024.03. 18.585465, 2024 | | 2024 |
| ScISOr-ATAC reveals convergent and divergent splicing and chromatin specificities between matched cell types across cortical regions, evolution, and in Alzheimer's disease. W Hu, C Foord, J Hsu, L Fan, MJ Corley, TN Bhatia, S Xu, N Belchikov, ... bioRxiv, 2024.02. 24.581897, 2024 | | 2024 |
| A Cell-Type Centric View of Alternative Splicing in the Mammalian Brain AP Joglekar Weill Medical College of Cornell University, 2022 | | 2022 |
| Research briefing A Joglekar, HU Tilgner | | |
