| Systematic protein location mapping reveals five principal chromatin types in Drosophila cells GJ Filion, JG van Bemmel, U Braunschweig, W Talhout, J Kind, LD Ward, ... Cell 143 (2), 212-224, 2010 | 1116 | 2010 |
| A family of human zinc finger proteins that bind methylated DNA and repress transcription GJP Filion, S Zhenilo, S Salozhin, D Yamada, E Prokhortchouk, ... Molecular and cellular biology 26 (1), 169-181, 2006 | 425 | 2006 |
| Transcription factors and 3D genome conformation in cell-fate decisions R Stadhouders, GJ Filion, T Graf Nature 569 (7756), 345-354, 2019 | 377 | 2019 |
| Distinct structural transitions of chromatin topological domains correlate with coordinated hormone-induced gene regulation F Le Dily, D Bau, A Pohl, GP Vicent, F Serra, D Soronellas, G Castellano, ... Genes & development 28 (19), 2151-2162, 2014 | 330 | 2014 |
| Transcription factors orchestrate dynamic interplay between genome topology and gene regulation during cell reprogramming R Stadhouders, E Vidal, F Serra, B Di Stefano, F Le Dily, J Quilez, ... Nature genetics 50 (2), 238-249, 2018 | 313 | 2018 |
| Automatic analysis and 3D-modelling of Hi-C data using TADbit reveals structural features of the fly chromatin colors F Serra, D Baù, M Goodstadt, D Castillo, GJ Filion, MA Marti-Renom PLoS computational biology 13 (7), e1005665, 2017 | 289* | 2017 |
| Sensing X chromosome pairs before X inactivation via a novel X-pairing region of the Xic S Augui, GJ Filion, S Huart, E Nora, M Guggiari, M Maresca, AF Stewart, ... Science 318 (5856), 1632-1636, 2007 | 219 | 2007 |
| Starcode: sequence clustering based on all-pairs search E Zorita, P Cusco, GJ Filion Bioinformatics 31 (12), 1913-1919, 2015 | 171 | 2015 |
| Methylation of DNA ligase 1 by G9a/GLP recruits UHRF1 to replicating DNA and regulates DNA methylation L Ferry, A Fournier, T Tsusaka, G Adelmant, T Shimazu, S Matano, ... Molecular cell 67 (4), 550-565. e5, 2017 | 164 | 2017 |
| Position effects influence HIV latency reversal HC Chen, JP Martinez, E Zorita, A Meyerhans, GJ Filion Nature structural & molecular biology 24 (1), 47-54, 2017 | 145 | 2017 |
| The human enhancer blocker CTC-binding factor interacts with the transcription factor Kaiso PA Defossez, KF Kelly, GJP Filion, R Pérez-Torrado, F Magdinier, ... Journal of Biological Chemistry 280 (52), 43017-43023, 2005 | 129 | 2005 |
| Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration B Lucic, HC Chen, M Kuzman, E Zorita, J Wegner, V Minneker, W Wang, ... Nature communications 10 (1), 4059, 2019 | 99 | 2019 |
| An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape VO Pokusaeva, DR Usmanova, EV Putintseva, L Espinar, KS Sarkisyan, ... PLoS genetics 15 (4), e1008079, 2019 | 76 | 2019 |
| A network model of the molecular organization of chromatin in Drosophila JG Van Bemmel, GJ Filion, A Rosado, W Talhout, M De Haas, ... Molecular cell 49 (4), 759-771, 2013 | 67 | 2013 |
| Reply to “Reassessing the abundance of H3K9me2 chromatin domains in embryonic stem cells” B Wen, H Wu, Y Shinkai, RA Irizarry, AP Feinberg Nature genetics 42 (1), 5-6, 2010 | 65 | 2010 |
| The inner nuclear membrane proteins Man1 and Ima1 link to two different types of chromatin at the nuclear periphery in S. pombe B Steglich, G Filion, B van Steensel, K Ekwall Nucleus 3 (1), 77-87, 2012 | 63 | 2012 |
| Bayesian network analysis of targeting interactions in chromatin B Van Steensel, U Braunschweig, GJ Filion, M Chen, JG van Bemmel, ... Genome research 20 (2), 190-200, 2010 | 62 | 2010 |
| OneD: increasing reproducibility of Hi-C samples with abnormal karyotypes E Vidal, F le Dily, J Quilez, R Stadhouders, Y Cuartero, T Graf, ... Nucleic acids research 46 (8), e49-e49, 2018 | 55 | 2018 |
| Clustering of Drosophila housekeeping promoters facilitates their expression M Corrales, A Rosado, R Cortini, J van Arensbergen, B van Steensel, ... Genome research 27 (7), 1153-1161, 2017 | 51 | 2017 |
| A new quinoline BRD4 inhibitor targets a distinct latent HIV-1 reservoir for reactivation from other “shock” drugs E Abner, M Stoszko, L Zeng, HC Chen, A Izquierdo-Bouldstridge, ... Journal of Virology 92 (10), 10.1128/jvi. 02056-17, 2018 | 48 | 2018 |
Marc A. Marti-RenomICREA Research Professor @ CNAG-CRGVerified email at cnag.crg.eu
