Gebruikersprofielen voor "Baubec, T. "

Tuncay Baubec

Chair of Genome Biology & Epigenetics, Utrecht University
Geverifieerd e-mailadres voor uu.nl
Geciteerd door 3580

Dynamics and context-dependent roles of DNA methylation

C Ambrosi, M Manzo, T Baubec - Journal of molecular biology, 2017 - Elsevier
DNA methylation is one of the most extensively studied epigenetic marks. It is involved in
transcriptional gene silencing and plays important roles during mammalian development. Its …

Genomic patterns and context specific interpretation of DNA methylation

T Baubec, D Schübeler - Current opinion in genetics & development, 2014 - Elsevier
Methylation of CpG dinucleotides is a reversible modification of DNA that is highly prevalent
throughout mammalian genomes. Recent advances generated genomic DNA methylation …

The Air noncoding RNA: an imprinted cis-silencing transcript

G Braidotti, T Baubec, F Pauler, C Seidl… - Cold Spring Harbor …, 2004 - symposium.cshlp.org
The observation that imprinted genes exist in clusters suggests that mechanisms to control
imprinted expression act on the chromosomal domain rather than on individual genes (Reik …

Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation

T Baubec, DF Colombo, C Wirbelauer, J Schmidt… - Nature, 2015 - nature.com
DNA methylation is an epigenetic modification associated with transcriptional repression of
promoters and is essential for mammalian development. Establishment of DNA methylation …

Epigenetic Regulation of Repetitive Elements Is Attenuated by Prolonged Heat Stress in Arabidopsis

A Pecinka, HQ Dinh, T Baubec, M Rosa… - The Plant …, 2010 - academic.oup.com
Epigenetic factors determine responses to internal and external stimuli in eukaryotic organisms.
Whether and how environmental conditions feed back to the epigenetic landscape is …

[HTML][HTML] Methylation-dependent and-independent genomic targeting principles of the MBD protein family

T Baubec, R Ivánek, F Lienert, D Schübeler - Cell, 2013 - cell.com
To gain insight into the cellular readout of DNA methylation, we established a strategy for
systematically profiling the genome-wide distribution of chromatin-interacting factors. This …

Genome-scale CRISPR screening in human intestinal organoids identifies drivers of TGF-β resistance

T Ringel, N Frey, F Ringnalda, S Janjuha, S Cherkaoui… - Cell stem cell, 2020 - cell.com
Forward genetic screens with genome-wide CRISPR libraries are powerful tools for resolving
cellular circuits and signaling pathways. Applying this technology to organoids, however, …

Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin

K Hiragami-Hamada, S Soeroes, M Nikolov… - Nature …, 2016 - nature.com
Histone H3 trimethylation of lysine 9 (H3K9me3) and proteins of the heterochromatin protein
1 (HP1) family are hallmarks of heterochromatin, a state of compacted DNA essential for …

Genomic prevalence of heterochromatic H3K9me2 and transcription do not discriminate pluripotent from terminally differentiated cells

F Lienert, F Mohn, VK Tiwari, T Baubec, TC Roloff… - PLoS …, 2011 - journals.plos.org
Cellular differentiation entails reprogramming of the transcriptome from a pluripotent to a
unipotent fate. This process was suggested to coincide with a global increase of repressive …

Effective, homogeneous and transient interference with cytosine methylation in plant genomic DNA by zebularine

T Baubec, A Pecinka, W Rozhon… - The Plant …, 2009 - Wiley Online Library
Covalent modification by methylation of cytosine residues represents an important epigenetic
hallmark. While sequence analysis after bisulphite conversion allows correlative analyses …