Shifting the limits in wheat research and breeding using a fully annotated reference genome
International Wheat Genome Sequencing Consortium … - Science, 2018 - science.org
INTRODUCTION Wheat (Triticum aestivum L.) is the most widely cultivated crop on Earth,
contributing about a fifth of the total calories consumed by humans. Consequently, wheat …
contributing about a fifth of the total calories consumed by humans. Consequently, wheat …
Multiple wheat genomes reveal global variation in modern breeding
Advances in genomics have expedited the improvement of several agriculturally important
crops but similar efforts in wheat (Triticum spp.) have been more challenging. This is largely …
crops but similar efforts in wheat (Triticum spp.) have been more challenging. This is largely …
The barley pan-genome reveals the hidden legacy of mutation breeding
M Jayakodi, S Padmarasu, G Haberer, VS Bonthala… - Nature, 2020 - nature.com
Genetic diversity is key to crop improvement. Owing to pervasive genomic structural variation,
a single reference genome assembly cannot capture the full complement of sequence …
a single reference genome assembly cannot capture the full complement of sequence …
Durum wheat genome highlights past domestication signatures and future improvement targets
The domestication of wild emmer wheat led to the selection of modern durum wheat, grown
mainly for pasta production. We describe the 10.45 gigabase (Gb) assembly of the genome …
mainly for pasta production. We describe the 10.45 gigabase (Gb) assembly of the genome …
Long-read sequence assembly: a technical evaluation in barley
Sequence assembly of large and repeat-rich plant genomes has been challenging, requiring
substantial computational resources and often several complementary sequence assembly …
substantial computational resources and often several complementary sequence assembly …
An investigation of methods for determining depth from focus
J Ens, P Lawrence - IEEE Transactions on pattern analysis and …, 1993 - ieeexplore.ieee.org
The concept of depth from focus involves calculating distances to points in an observed scene
by modeling the effect that the camera's focal parameters have on images acquired with a …
by modeling the effect that the camera's focal parameters have on images acquired with a …
TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools
Chromosome-scale genome sequence assemblies underpin pan-genomic studies. Recent
genome assembly efforts in the large-genome Triticeae crops wheat and barley have relied …
genome assembly efforts in the large-genome Triticeae crops wheat and barley have relied …
Dissection of a rapidly evolving wheat resistance gene cluster by long-read genome sequencing accelerated the cloning of Pm69
Gene cloning in repeat-rich polyploid genomes remains challenging. Here, we describe a
strategy for overcoming major bottlenecks in cloning of the powdery mildew resistance gene (R…
strategy for overcoming major bottlenecks in cloning of the powdery mildew resistance gene (R…
Aegilops sharonensis genome-assisted identification of stem rust resistance gene Sr62
The wild relatives and progenitors of wheat have been widely used as sources of disease
resistance (R) genes. Molecular identification and characterization of these R genes facilitates …
resistance (R) genes. Molecular identification and characterization of these R genes facilitates …
Discovery of stripe rust resistance with incomplete dominance in wild emmer wheat using bulked segregant analysis sequencing
Durable crop disease resistance is an essential component of global food security. Continuous
pathogen evolution leads to a breakdown of resistance and there is a pressing need to …
pathogen evolution leads to a breakdown of resistance and there is a pressing need to …