Ammonia-oxidizing bacteria: a model for molecular microbial ecology

GA Kowalchuk, JR Stephen - Annual Reviews in Microbiology, 2001 - annualreviews.org
▪ Abstract The eutrophication of many ecosystems in recent decades has led to an increased
interest in the ecology of nitrogen transformation. Chemolitho-autotrophic ammonia-…

Nitrification in acid soils: micro-organisms and mechanisms

W De Boer, GA Kowalchuk - Soil Biology and Biochemistry, 2001 - Elsevier
Nitrification in acid soils was first reported in the beginning of the 20th century. Although this
finding has been well substantiated by countless studies since then, it has until recently …

[HTML][HTML] The Ecology of Acidobacteria: Moving beyond Genes and Genomes

AM Kielak, CC Barreto, GA Kowalchuk… - Frontiers in …, 2016 - frontiersin.org
The phylum Acidobacteria is one of the most widespread and abundant on the planet, yet
remarkably our knowledge of the role of these diverse organisms in the functioning of …

Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and …

GA Kowalchuk, JR Stephen, W De Boer… - Applied and …, 1997 - Am Soc Microbiol
Denaturing gradient gel electrophoresis (DGGE) is a powerful and convenient tool for analyzing
the sequence diversity of complex natural microbial populations. DGGE was evaluated …

Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms

GA Kowalchuk, DS Buma, W de Boer… - Antonie van …, 2002 - Springer
A coupling of above-ground plant diversity and below-ground microbial diversity has been
implied in studies dedicated to assessing the role of macrophyte diversity on the stability, …

Reciprocal rewards stabilize cooperation in the mycorrhizal symbiosis

ET Kiers, M Duhamel, Y Beesetty, JA Mensah… - science, 2011 - science.org
Plants and their arbuscular mycorrhizal fungal symbionts interact in complex underground
networks involving multiple partners. This increases the potential for exploitation and …

Molecular Analysis of Ammonia-Oxidizing Bacteria of the β Subdivision of the Class Proteobacteria in Compost and Composted Materials

GA Kowalchuk, ZS Naoumenko… - Applied and …, 1999 - Am Soc Microbiol
Although the practice of composting animal wastes for use as biofertilizers has increased in
recent years, little is known about the microorganisms responsible for the nitrogen …

Community analysis of arbuscular mycorrhizal fungi associated with Ammophila arenaria in Dutch coastal sand dunes

GA Kowalchuk, FA De Souza… - Molecular …, 2002 - Wiley Online Library
A polymerase chain reaction‐denaturing gradient gel electrophoresis (PCR‐DGGE)
approach for the detection and characterization of arbuscular mycorrhizal fungi (AMF) 18S …

Micro-scale determinants of bacterial diversity in soil

M Vos, AB Wolf, SJ Jennings… - FEMS microbiology …, 2013 - academic.oup.com
Soil habitats contain vast numbers of microorganisms and harbor a large portion of the
planet's biological diversity. Although high-throughput sequencing technologies continue to …

Community analysis of ammonia-oxidising bacteria, in relation to oxygen availability in soils and root-oxygenated sediments, using PCR, DGGE and oligonucleotide …

GA Kowalchuk, PLE Bodelier, GHJ Heilig… - FEMS Microbiology …, 1998 - academic.oup.com
The rhizosphere of oxygen-releasing wetland plants provides a niche for oxygen-consuming
microorganisms such as chemolithotrophic ammonia-oxidising bacteria. These bacteria are …