Ammonia-oxidizing bacteria: a model for molecular microbial ecology

GA Kowalchuk, JR Stephen - Annual Reviews in Microbiology, 2001 - annualreviews.org
▪ Abstract The eutrophication of many ecosystems in recent decades has led to an increased
interest in the ecology of nitrogen transformation. Chemolitho-autotrophic ammonia-…

Nitrification in acid soils: micro-organisms and mechanisms

W De Boer, GA Kowalchuk - Soil Biology and Biochemistry, 2001 - Elsevier
Nitrification in acid soils was first reported in the beginning of the 20th century. Although this
finding has been well substantiated by countless studies since then, it has until recently …

[HTML][HTML] The ecology of Acidobacteria: moving beyond genes and genomes

AM Kielak, CC Barreto, GA Kowalchuk… - Frontiers in …, 2016 - frontiersin.org
The phylum Acidobacteria is one of the most widespread and abundant on the planet, yet
remarkably our knowledge of the role of these diverse organisms in the functioning of …

Reciprocal rewards stabilize cooperation in the mycorrhizal symbiosis

ET Kiers, M Duhamel, Y Beesetty, JA Mensah… - science, 2011 - science.org
Plants and their arbuscular mycorrhizal fungal symbionts interact in complex underground
networks involving multiple partners. This increases the potential for exploitation and …

Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and …

GA Kowalchuk, JR Stephen, W De Boer… - Applied and …, 1997 - Am Soc Microbiol
Denaturing gradient gel electrophoresis (DGGE) is a powerful and convenient tool for analyzing
the sequence diversity of complex natural microbial populations. DGGE was evaluated …

Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms

GA Kowalchuk, DS Buma, W De Boer… - Antonie van …, 2002 - Springer
A coupling of above-ground plant diversity and below-ground microbial diversity has been
implied in studies dedicated to assessing the role of macrophyte diversity on the stability, …

Micro-scale determinants of bacterial diversity in soil

M Vos, AB Wolf, SJ Jennings… - FEMS microbiology …, 2013 - academic.oup.com
Soil habitats contain vast numbers of microorganisms and harbor a large portion of the
planet's biological diversity. Although high-throughput sequencing technologies continue to …

Positive effects of organic farming on below‐ground mutualists: large‐scale comparison of mycorrhizal fungal communities in agricultural soils

E Verbruggen, WFM Röling, HA Gamper… - New …, 2010 - Wiley Online Library
• The impact of various agricultural practices on soil biodiversity and, in particular, on arbuscular
mycorrhizal fungi (AMF), is still poorly understood, although AMF can provide benefit to …

Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2

B Drigo, AS Pijl, H Duyts, AM Kielak… - Proceedings of the …, 2010 - National Acad Sciences
Rising atmospheric CO 2 levels are predicted to have major consequences on carbon cycling
and the functioning of terrestrial ecosystems. Increased photosynthetic activity is expected, …

Soil characteristics more strongly influence soil bacterial communities than land-use type

EE Kuramae, E Yergeau, LC Wong… - FEMS Microbiology …, 2012 - academic.oup.com
To gain insight into the factors driving the structure of bacterial communities in soil, we
applied real-time PCR, PCR-denaturing gradient gel electrophoreses, and phylogenetic …